Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 CLNS1A-201ENST00000263309 1172 ntTSL 3 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC024475.2-201ENST00000312173 879 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC005037.1-202ENST00000332935 820 ntTSL 3 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 EEF1GP3-201ENST00000421044 1288 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 RN7SL229P-201ENST00000495651 299 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 GCOM2-201ENST00000509133 1104 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 ALG1L14P-201ENST00000514230 434 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC116553.1-201ENST00000561752 397 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC092368.1-201ENST00000568014 733 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 HP-215ENST00000569639 568 ntTSL 4 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC009090.5-201ENST00000624886 2285 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 CPA4-210ENST00000493259 1512 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 TMIGD1-201ENST00000328886 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 KRTAP20-2-201ENST00000330798 384 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 RNA5SP491-201ENST00000362936 118 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 HSD17B3-202ENST00000375263 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AL356479.1-202ENST00000456933 714 ntTSL 3 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AL121929.1-201ENST00000457120 524 ntTSL 3 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 RPL14P3-201ENST00000476715 622 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 RAB42P1-201ENST00000555078 316 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 MBL3P-201ENST00000402234 644 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC064836.1-201ENST00000405197 704 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AL021407.3-201ENST00000407522 486 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AL356488.1-201ENST00000429752 609 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC004771.2-201ENST00000430920 439 ntTSL 3 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 PGAM1P2-201ENST00000436071 725 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AP000926.2-201ENST00000469983 358 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 RN7SL559P-201ENST00000476501 297 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 EHF-205ENST00000527935 557 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC020917.2-201ENST00000587343 401 ntTSL 3 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC245748.2-201ENST00000588655 574 ntTSL 4 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 AC013472.3-201ENST00000607407 659 ntBASIC4.27□□□□□ -1.73
HMCN1Q96RW7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
HMCN1Q96RW7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms