Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 MIR1202-201ENST00000408529 83 ntBASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 AL161932.2-201ENST00000435436 679 ntBASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 AC005225.4-201ENST00000557330 545 ntBASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 MST1P2-201ENST00000457982 2291 ntBASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.38□□□□□ -0.11
PDLIM5Q96HC4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 AC117489.1-201ENST00000625169 3217 ntBASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 BOLA2P3-201ENST00000404566 256 ntBASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 KRT17P7-201ENST00000451704 1104 ntBASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 COX20P2-201ENST00000452636 358 ntBASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 AC079316.1-201ENST00000548397 411 ntBASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms