Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AC015688.4-201ENST00000580780 1647 ntBASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.27■□□□□ 0.35
SMARCC2Q8TAQ2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMARCC2Q8TAQ2 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.27■□□□□ 0.35
SMARCC2Q8TAQ2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMARCC2Q8TAQ2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMARCC2Q8TAQ2 AC009093.2-202ENST00000620513 2079 ntBASIC17.27■□□□□ 0.35
SMARCC2Q8TAQ2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.27■□□□□ 0.35
SMARCC2Q8TAQ2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMARCC2Q8TAQ2 AC139712.1-201ENST00000378256 1875 ntBASIC17.27■□□□□ 0.35
SMARCC2Q8TAQ2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.27■□□□□ 0.35
SMARCC2Q8TAQ2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 FKBP4P6-201ENST00000457486 1332 ntBASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 AC020910.6-201ENST00000623084 1459 ntBASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 RN7SKP175-201ENST00000408472 289 ntBASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 AP003171.2-201ENST00000528208 925 ntBASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 OR10B1P-201ENST00000601666 907 ntBASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCC2Q8TAQ2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 AL355994.2-201ENST00000447882 704 ntBASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 COX5BP1-201ENST00000507622 393 ntBASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 AC106820.3-201ENST00000561653 397 ntBASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 RN7SL560P-201ENST00000577943 264 ntBASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms