Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 CICP16-201ENST00000502609 2813 ntBASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DNAAF1Q8NEP3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
DNAAF1Q8NEP3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
DNAAF1Q8NEP3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
DNAAF1Q8NEP3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
DNAAF1Q8NEP3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
DNAAF1Q8NEP3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.08□□□□□ -0.31
DNAAF1Q8NEP3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.08□□□□□ -0.31
DNAAF1Q8NEP3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
DNAAF1Q8NEP3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
DNAAF1Q8NEP3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
DNAAF1Q8NEP3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
DNAAF1Q8NEP3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 IGHV3-42-201ENST00000520410 361 ntBASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 AC009407.1-201ENST00000568958 598 ntBASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 AL356585.2-201ENST00000625078 2396 ntBASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DNAAF1Q8NEP3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 AC105206.1-202ENST00000314927 2368 ntBASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 RARRES2P5-201ENST00000564013 466 ntBASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 AC036164.1-201ENST00000570544 333 ntBASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.07□□□□□ -0.32
DNAAF1Q8NEP3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms