Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 AC026316.1-201ENST00000398900 414 ntBASIC17.49■□□□□ 0.39
SLF2Q8IX21 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.49■□□□□ 0.39
SLF2Q8IX21 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.49■□□□□ 0.39
SLF2Q8IX21 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.49■□□□□ 0.39
SLF2Q8IX21 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 RN7SL67P-201ENST00000492147 296 ntBASIC17.49■□□□□ 0.39
SLF2Q8IX21 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.49■□□□□ 0.39
SLF2Q8IX21 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.49■□□□□ 0.39
SLF2Q8IX21 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SLF2Q8IX21 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 AL591471.1-201ENST00000621855 229 ntBASIC17.49■□□□□ 0.39
SLF2Q8IX21 AP001002.2-201ENST00000625137 386 ntBASIC17.49■□□□□ 0.39
SLF2Q8IX21 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLF2Q8IX21 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLF2Q8IX21 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 KRT18P9-201ENST00000604826 1300 ntBASIC17.48■□□□□ 0.39
SLF2Q8IX21 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 TCAF2P1-201ENST00000291129 2421 ntBASIC17.48■□□□□ 0.39
SLF2Q8IX21 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 MYO15B-237ENST00000642007 4893 ntBASIC17.48■□□□□ 0.39
SLF2Q8IX21 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 AL627231.1-201ENST00000394467 1125 ntBASIC17.48■□□□□ 0.39
SLF2Q8IX21 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 AL592076.1-201ENST00000424448 303 ntBASIC17.48■□□□□ 0.39
SLF2Q8IX21 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 PHBP15-201ENST00000574228 665 ntBASIC17.48■□□□□ 0.39
SLF2Q8IX21 AL109837.1-201ENST00000603272 613 ntBASIC17.48■□□□□ 0.39
SLF2Q8IX21 AC103691.2-201ENST00000618824 433 ntBASIC17.48■□□□□ 0.39
SLF2Q8IX21 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.48■□□□□ 0.39
SLF2Q8IX21 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLF2Q8IX21 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLF2Q8IX21 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLF2Q8IX21 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF2Q8IX21 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF2Q8IX21 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF2Q8IX21 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.47■□□□□ 0.39
SLF2Q8IX21 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SLF2Q8IX21 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SLF2Q8IX21 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLF2Q8IX21 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF2Q8IX21 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.47■□□□□ 0.39
SLF2Q8IX21 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms