Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 RPSAP36-202ENST00000494591 1261 ntBASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 AP003171.2-201ENST00000528208 925 ntBASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 AC138696.2-201ENST00000607376 223 ntBASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 SALL4P5-201ENST00000419001 1760 ntBASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 RN7SKP175-201ENST00000408472 289 ntBASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 TLE1P1-201ENST00000422965 589 ntBASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 MIR4683-201ENST00000579659 81 ntBASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 AC005695.3-201ENST00000614522 232 ntBASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 AL136301.1-201ENST00000615830 422 ntBASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 AC023090.2-201ENST00000625182 2110 ntBASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM48Q8IWZ4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 AC020910.5-201ENST00000623668 1865 ntBASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 AL096828.3-201ENST00000615354 462 ntBASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 AP001002.3-201ENST00000623482 206 ntBASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms