Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 OR8S1-201ENST00000310194 1080 ntBASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 SORD2P-201ENST00000558556 1069 ntBASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 DUX4L45-201ENST00000566406 1057 ntBASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 MIR4741-201ENST00000579822 90 ntBASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 MIR6805-201ENST00000615055 62 ntBASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.5■□□□□ 0.07
PTPN20Q4JDL3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 BNIP3P42-201ENST00000454982 569 ntBASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 AC132192.2-201ENST00000596206 1147 ntBASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 BNIP3P29-201ENST00000598302 571 ntBASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 AC011447.5-201ENST00000616168 564 ntBASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN20Q4JDL3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms