Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC10.47□□□□□ -0.73
CKS1BP61024 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CKS1BP61024 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC10.47□□□□□ -0.73
CKS1BP61024 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
CKS1BP61024 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CKS1BP61024 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC10.47□□□□□ -0.73
CKS1BP61024 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
CKS1BP61024 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS1BP61024 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS1BP61024 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.47□□□□□ -0.73
CKS1BP61024 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CKS1BP61024 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 HLA-H-201ENST00000383620 1096 ntBASIC10.47□□□□□ -0.73
CKS1BP61024 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
CKS1BP61024 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CKS1BP61024 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.47□□□□□ -0.73
CKS1BP61024 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 RN7SL589P-201ENST00000481268 310 ntBASIC10.47□□□□□ -0.73
CKS1BP61024 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 IGHV3-22-201ENST00000520721 359 ntBASIC10.47□□□□□ -0.73
CKS1BP61024 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS1BP61024 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CKS1BP61024 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 AL138918.1-201ENST00000568306 659 ntBASIC10.47□□□□□ -0.73
CKS1BP61024 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CKS1BP61024 AC027307.2-201ENST00000591252 911 ntBASIC10.47□□□□□ -0.73
CKS1BP61024 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC10.47□□□□□ -0.73
CKS1BP61024 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.47□□□□□ -0.73
CKS1BP61024 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC10.47□□□□□ -0.73
CKS1BP61024 AC008267.7-201ENST00000624570 1194 ntBASIC10.47□□□□□ -0.73
CKS1BP61024 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
CKS1BP61024 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 AP002008.2-201ENST00000635926 4870 ntBASIC10.47□□□□□ -0.73
CKS1BP61024 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.47□□□□□ -0.73
CKS1BP61024 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CKS1BP61024 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC10.47□□□□□ -0.73
CKS1BP61024 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS1BP61024 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS1BP61024 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS1BP61024 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.47□□□□□ -0.73
CKS1BP61024 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC10.47□□□□□ -0.73
CKS1BP61024 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS1BP61024 BX640514.1-201ENST00000583223 1918 ntBASIC10.46□□□□□ -0.73
CKS1BP61024 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CKS1BP61024 UBTFL8-201ENST00000426903 2112 ntBASIC10.46□□□□□ -0.73
CKS1BP61024 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC10.46□□□□□ -0.73
CKS1BP61024 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC10.46□□□□□ -0.73
CKS1BP61024 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC10.46□□□□□ -0.73
CKS1BP61024 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.73
CKS1BP61024 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC10.46□□□□□ -0.73
CKS1BP61024 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
CKS1BP61024 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms