Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH15P55291 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
CDH15P55291 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.87□□□□□ -0.19
CDH15P55291 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH15P55291 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.87□□□□□ -0.19
CDH15P55291 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH15P55291 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.87□□□□□ -0.19
CDH15P55291 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.87□□□□□ -0.19
CDH15P55291 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH15P55291 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.87□□□□□ -0.19
CDH15P55291 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.87□□□□□ -0.19
CDH15P55291 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.87□□□□□ -0.19
CDH15P55291 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.87□□□□□ -0.19
CDH15P55291 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH15P55291 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH15P55291 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH15P55291 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.87□□□□□ -0.19
CDH15P55291 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH15P55291 MEX3B-202ENST00000558133 4333 ntBASIC13.87□□□□□ -0.19
CDH15P55291 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH15P55291 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CDH15P55291 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
CDH15P55291 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CDH15P55291 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH15P55291 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.87□□□□□ -0.19
CDH15P55291 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CDH15P55291 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH15P55291 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH15P55291 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH15P55291 TCAM1P-207ENST00000485295 1537 ntBASIC13.86□□□□□ -0.19
CDH15P55291 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH15P55291 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CDH15P55291 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 SPDYE14P-201ENST00000442619 822 ntBASIC13.86□□□□□ -0.19
CDH15P55291 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH15P55291 AC140878.1-201ENST00000565277 250 ntBASIC13.86□□□□□ -0.19
CDH15P55291 AC138761.1-201ENST00000584393 385 ntBASIC13.86□□□□□ -0.19
CDH15P55291 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.86□□□□□ -0.19
CDH15P55291 AC027307.2-201ENST00000591252 911 ntBASIC13.86□□□□□ -0.19
CDH15P55291 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CDH15P55291 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDH15P55291 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 AGAP10P-201ENST00000454844 2418 ntBASIC13.86□□□□□ -0.19
CDH15P55291 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH15P55291 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH15P55291 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH15P55291 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH15P55291 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH15P55291 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CDH15P55291 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.85□□□□□ -0.19
CDH15P55291 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CDH15P55291 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH15P55291 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH15P55291 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH15P55291 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CDH15P55291 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH15P55291 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
CDH15P55291 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH15P55291 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH15P55291 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH15P55291 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CDH15P55291 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms