Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
AFDNP55196 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.2■□□□□ 0.5
AFDNP55196 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AFDNP55196 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AFDNP55196 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
AFDNP55196 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
AFDNP55196 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AFDNP55196 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
AFDNP55196 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AFDNP55196 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
AFDNP55196 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 KRT17P5-201ENST00000332088 839 ntBASIC18.19■□□□□ 0.5
AFDNP55196 COX20P1-201ENST00000366529 357 ntBASIC18.19■□□□□ 0.5
AFDNP55196 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC18.19■□□□□ 0.5
AFDNP55196 GUSBP10-201ENST00000417412 665 ntBASIC18.19■□□□□ 0.5
AFDNP55196 OR8T1P-201ENST00000421347 918 ntBASIC18.19■□□□□ 0.5
AFDNP55196 RPS23-204ENST00000507980 836 ntTSL 2 BASIC18.19■□□□□ 0.5
AFDNP55196 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC18.19■□□□□ 0.5
AFDNP55196 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC18.19■□□□□ 0.5
AFDNP55196 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.19■□□□□ 0.5
AFDNP55196 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
AFDNP55196 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.19■□□□□ 0.5
AFDNP55196 MIR645-201ENST00000385283 94 ntBASIC18.19■□□□□ 0.5
AFDNP55196 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.19■□□□□ 0.5
AFDNP55196 RGS5-216ENST00000449680 788 ntTSL 3 BASIC18.19■□□□□ 0.5
AFDNP55196 SCARNA12-201ENST00000459155 270 ntBASIC18.19■□□□□ 0.5
AFDNP55196 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.19■□□□□ 0.5
AFDNP55196 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
AFDNP55196 TP53-221ENST00000615910 1149 ntTSL 5 BASIC18.19■□□□□ 0.5
AFDNP55196 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AFDNP55196 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
AFDNP55196 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
AFDNP55196 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
AFDNP55196 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
AFDNP55196 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.18■□□□□ 0.5
AFDNP55196 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.18■□□□□ 0.5
AFDNP55196 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.18■□□□□ 0.5
AFDNP55196 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC18.18■□□□□ 0.5
AFDNP55196 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC18.18■□□□□ 0.5
AFDNP55196 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.18■□□□□ 0.5
AFDNP55196 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AFDNP55196 AL390755.1-201ENST00000623716 2027 ntBASIC18.18■□□□□ 0.5
AFDNP55196 AGGF1P1-201ENST00000509500 2073 ntBASIC18.18■□□□□ 0.5
AFDNP55196 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
AFDNP55196 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
AFDNP55196 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AFDNP55196 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
AFDNP55196 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AFDNP55196 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AFDNP55196 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AFDNP55196 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
AFDNP55196 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
AFDNP55196 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AFDNP55196 AC090505.1-201ENST00000430515 1834 ntBASIC18.17■□□□□ 0.5
AFDNP55196 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.17■□□□□ 0.5
AFDNP55196 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AFDNP55196 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
AFDNP55196 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC18.17■□□□□ 0.5
AFDNP55196 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC18.17■□□□□ 0.5
AFDNP55196 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.17■□□□□ 0.5
AFDNP55196 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18.17■□□□□ 0.5
AFDNP55196 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC18.17■□□□□ 0.5
AFDNP55196 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AFDNP55196 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AFDNP55196 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
AFDNP55196 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AFDNP55196 AP000322.3-201ENST00000608665 388 ntBASIC18.17■□□□□ 0.5
AFDNP55196 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
AFDNP55196 AC011498.7-201ENST00000624986 2027 ntBASIC18.17■□□□□ 0.5
AFDNP55196 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
AFDNP55196 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.17■□□□□ 0.5
AFDNP55196 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.17■□□□□ 0.5
AFDNP55196 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms