Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.86□□□□□ -0.03
MDH1P40925 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 AC131902.2-201ENST00000566892 2172 ntBASIC14.85□□□□□ -0.03
MDH1P40925 AC073869.1-201ENST00000415574 2762 ntBASIC14.85□□□□□ -0.03
MDH1P40925 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MDH1P40925 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MDH1P40925 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
MDH1P40925 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
MDH1P40925 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.85□□□□□ -0.03
MDH1P40925 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MDH1P40925 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MDH1P40925 AL355102.3-201ENST00000554299 1678 ntBASIC14.85□□□□□ -0.03
MDH1P40925 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MDH1P40925 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MDH1P40925 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MDH1P40925 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MDH1P40925 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
MDH1P40925 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.85□□□□□ -0.03
MDH1P40925 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.85□□□□□ -0.03
MDH1P40925 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.85□□□□□ -0.03
MDH1P40925 SLC25A39P2-201ENST00000537614 270 ntBASIC14.85□□□□□ -0.03
MDH1P40925 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
MDH1P40925 AC026150.2-201ENST00000564693 1156 ntBASIC14.85□□□□□ -0.03
MDH1P40925 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
MDH1P40925 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.85□□□□□ -0.03
MDH1P40925 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.85□□□□□ -0.03
MDH1P40925 AL133215.2-201ENST00000609242 977 ntBASIC14.85□□□□□ -0.03
MDH1P40925 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.85□□□□□ -0.03
MDH1P40925 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.85□□□□□ -0.03
MDH1P40925 AC084121.4-201ENST00000641598 221 ntBASIC14.85□□□□□ -0.03
MDH1P40925 AF228730.8-201ENST00000642140 221 ntBASIC14.85□□□□□ -0.03
MDH1P40925 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MDH1P40925 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.85□□□□□ -0.03
MDH1P40925 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MDH1P40925 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
MDH1P40925 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.85□□□□□ -0.03
MDH1P40925 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MDH1P40925 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MDH1P40925 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
MDH1P40925 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MDH1P40925 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.85□□□□□ -0.03
MDH1P40925 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MDH1P40925 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.85□□□□□ -0.03
MDH1P40925 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MDH1P40925 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.84□□□□□ -0.03
MDH1P40925 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MDH1P40925 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
MDH1P40925 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MDH1P40925 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.84□□□□□ -0.03
MDH1P40925 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MDH1P40925 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
MDH1P40925 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.84□□□□□ -0.03
MDH1P40925 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 AL391647.1-201ENST00000395664 511 ntBASIC14.84□□□□□ -0.03
MDH1P40925 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.84□□□□□ -0.03
MDH1P40925 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.84□□□□□ -0.03
MDH1P40925 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.84□□□□□ -0.03
MDH1P40925 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.84□□□□□ -0.03
MDH1P40925 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.84□□□□□ -0.03
MDH1P40925 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.84□□□□□ -0.03
MDH1P40925 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.84□□□□□ -0.03
MDH1P40925 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.84□□□□□ -0.03
MDH1P40925 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
MDH1P40925 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
MDH1P40925 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.84□□□□□ -0.03
MDH1P40925 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.84□□□□□ -0.03
MDH1P40925 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MDH1P40925 PCDHA6-201ENST00000378126 3267 ntBASIC14.84□□□□□ -0.03
MDH1P40925 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
MDH1P40925 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MDH1P40925 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms