Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
KRT9P35527 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT9P35527 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT9P35527 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT9P35527 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT9P35527 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT9P35527 AL139094.1-201ENST00000405549 1188 ntBASIC16.22■□□□□ 0.19
KRT9P35527 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT9P35527 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT9P35527 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT9P35527 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.22■□□□□ 0.19
KRT9P35527 AC124283.3-201ENST00000570869 594 ntBASIC16.22■□□□□ 0.19
KRT9P35527 SPDYE22P-201ENST00000582158 798 ntBASIC16.22■□□□□ 0.19
KRT9P35527 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT9P35527 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.22■□□□□ 0.19
KRT9P35527 AC008494.3-201ENST00000606615 944 ntBASIC16.22■□□□□ 0.19
KRT9P35527 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT9P35527 RN7SL832P-201ENST00000607781 1756 ntBASIC16.22■□□□□ 0.19
KRT9P35527 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
KRT9P35527 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT9P35527 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT9P35527 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
KRT9P35527 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT9P35527 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT9P35527 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KRT9P35527 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT9P35527 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT9P35527 AC020910.6-201ENST00000623084 1459 ntBASIC16.22■□□□□ 0.19
KRT9P35527 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT9P35527 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT9P35527 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT9P35527 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KRT9P35527 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT9P35527 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT9P35527 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT9P35527 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT9P35527 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT9P35527 MYADML-201ENST00000474610 2147 ntBASIC16.21■□□□□ 0.19
KRT9P35527 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT9P35527 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
KRT9P35527 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT9P35527 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
KRT9P35527 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT9P35527 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.21■□□□□ 0.19
KRT9P35527 ELK1P1-201ENST00000485699 580 ntBASIC16.21■□□□□ 0.19
KRT9P35527 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT9P35527 AC190387.1-201ENST00000551683 408 ntBASIC16.21■□□□□ 0.19
KRT9P35527 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT9P35527 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
KRT9P35527 AC140912.1-201ENST00000577171 1054 ntBASIC16.21■□□□□ 0.19
KRT9P35527 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT9P35527 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT9P35527 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT9P35527 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
KRT9P35527 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT9P35527 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.21■□□□□ 0.19
KRT9P35527 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT9P35527 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KRT9P35527 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KRT9P35527 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
KRT9P35527 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT9P35527 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT9P35527 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
KRT9P35527 AC126335.2-201ENST00000623362 4637 ntBASIC16.2■□□□□ 0.18
KRT9P35527 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT9P35527 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT9P35527 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT9P35527 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT9P35527 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
KRT9P35527 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT9P35527 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KRT9P35527 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT9P35527 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
KRT9P35527 AC130686.1-201ENST00000622936 2466 ntBASIC16.2■□□□□ 0.18
KRT9P35527 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT9P35527 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT9P35527 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
KRT9P35527 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms