Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CCL4P13236 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL4P13236 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 Z69890.1-201ENST00000382990 339 ntBASIC13.81□□□□□ -0.2
CCL4P13236 AL355334.1-201ENST00000417713 215 ntBASIC13.81□□□□□ -0.2
CCL4P13236 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL4P13236 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL4P13236 CHCHD2P9-201ENST00000461726 456 ntBASIC13.81□□□□□ -0.2
CCL4P13236 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 AC130709.1-201ENST00000484779 1212 ntBASIC13.81□□□□□ -0.2
CCL4P13236 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL4P13236 AC009560.1-201ENST00000620208 434 ntBASIC13.81□□□□□ -0.2
CCL4P13236 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 AC015688.4-201ENST00000580780 1647 ntBASIC13.81□□□□□ -0.2
CCL4P13236 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 AC067930.6-201ENST00000623257 4947 ntBASIC13.81□□□□□ -0.2
CCL4P13236 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCL4P13236 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL4P13236 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CCL4P13236 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL4P13236 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL4P13236 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL4P13236 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL4P13236 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL4P13236 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL4P13236 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL4P13236 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCL4P13236 KRT17P5-201ENST00000332088 839 ntBASIC13.8□□□□□ -0.2
CCL4P13236 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL4P13236 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCL4P13236 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL4P13236 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL4P13236 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL4P13236 ST13P19-201ENST00000442505 1124 ntBASIC13.8□□□□□ -0.2
CCL4P13236 FTH1P22-201ENST00000456305 520 ntBASIC13.8□□□□□ -0.2
CCL4P13236 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL4P13236 RN7SL818P-201ENST00000485099 259 ntBASIC13.8□□□□□ -0.2
CCL4P13236 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL4P13236 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL4P13236 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL4P13236 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL4P13236 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CCL4P13236 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
CCL4P13236 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL4P13236 MIR4649-201ENST00000582839 64 ntBASIC13.8□□□□□ -0.2
CCL4P13236 RN7SL725P-201ENST00000606439 259 ntBASIC13.8□□□□□ -0.2
CCL4P13236 AC009084.3-201ENST00000623356 437 ntBASIC13.8□□□□□ -0.2
CCL4P13236 AC073347.1-201ENST00000421633 2643 ntBASIC13.8□□□□□ -0.2
CCL4P13236 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL4P13236 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL4P13236 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CCL4P13236 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL4P13236 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL4P13236 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CCL4P13236 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL4P13236 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL4P13236 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
CCL4P13236 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL4P13236 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL4P13236 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL4P13236 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL4P13236 KHSRPP1-201ENST00000427983 1768 ntBASIC13.79□□□□□ -0.2
CCL4P13236 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CCL4P13236 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL4P13236 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL4P13236 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL4P13236 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL4P13236 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL4P13236 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CCL4P13236 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL4P13236 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CCL4P13236 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL4P13236 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL4P13236 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.79□□□□□ -0.2
CCL4P13236 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms