Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
BMP4P12644 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.67□□□□□ -0.22
BMP4P12644 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
BMP4P12644 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.67□□□□□ -0.22
BMP4P12644 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
BMP4P12644 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.67□□□□□ -0.22
BMP4P12644 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.67□□□□□ -0.22
BMP4P12644 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.67□□□□□ -0.22
BMP4P12644 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.67□□□□□ -0.22
BMP4P12644 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.67□□□□□ -0.22
BMP4P12644 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.67□□□□□ -0.22
BMP4P12644 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
BMP4P12644 RRP7BP-205ENST00000566851 833 ntBASIC13.67□□□□□ -0.22
BMP4P12644 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.67□□□□□ -0.22
BMP4P12644 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.67□□□□□ -0.22
BMP4P12644 SRD5A3P1-201ENST00000603021 949 ntBASIC13.67□□□□□ -0.22
BMP4P12644 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
BMP4P12644 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
BMP4P12644 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
BMP4P12644 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
BMP4P12644 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
BMP4P12644 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
BMP4P12644 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.67□□□□□ -0.22
BMP4P12644 AC073548.1-201ENST00000624088 1882 ntBASIC13.67□□□□□ -0.22
BMP4P12644 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.67□□□□□ -0.22
BMP4P12644 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BMP4P12644 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.67□□□□□ -0.22
BMP4P12644 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.66□□□□□ -0.22
BMP4P12644 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.66□□□□□ -0.22
BMP4P12644 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
BMP4P12644 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.66□□□□□ -0.22
BMP4P12644 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.66□□□□□ -0.22
BMP4P12644 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.66□□□□□ -0.22
BMP4P12644 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
BMP4P12644 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.66□□□□□ -0.22
BMP4P12644 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.66□□□□□ -0.22
BMP4P12644 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.66□□□□□ -0.22
BMP4P12644 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.66□□□□□ -0.22
BMP4P12644 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.66□□□□□ -0.22
BMP4P12644 TPT1P11-201ENST00000458482 498 ntBASIC13.66□□□□□ -0.22
BMP4P12644 RN7SL752P-201ENST00000463779 287 ntBASIC13.66□□□□□ -0.22
BMP4P12644 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.66□□□□□ -0.22
BMP4P12644 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.66□□□□□ -0.22
BMP4P12644 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.66□□□□□ -0.22
BMP4P12644 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.66□□□□□ -0.22
BMP4P12644 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.66□□□□□ -0.22
BMP4P12644 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
BMP4P12644 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.66□□□□□ -0.22
BMP4P12644 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.66□□□□□ -0.22
BMP4P12644 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.66□□□□□ -0.22
BMP4P12644 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 AC099568.2-201ENST00000609194 695 ntBASIC13.66□□□□□ -0.22
BMP4P12644 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.66□□□□□ -0.22
BMP4P12644 AL109936.8-201ENST00000641772 604 ntBASIC13.66□□□□□ -0.22
BMP4P12644 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.66□□□□□ -0.22
BMP4P12644 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
BMP4P12644 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 SLC7A15P-201ENST00000424028 1363 ntBASIC13.66□□□□□ -0.22
BMP4P12644 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
BMP4P12644 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.66□□□□□ -0.22
BMP4P12644 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BMP4P12644 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms