Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC28A2O43868 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC28A2O43868 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC28A2O43868 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
SLC28A2O43868 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC28A2O43868 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SLC28A2O43868 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC28A2O43868 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC28A2O43868 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SLC28A2O43868 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.33□□□□□ -0.11
SLC28A2O43868 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.33□□□□□ -0.11
SLC28A2O43868 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.33□□□□□ -0.11
SLC28A2O43868 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SLC28A2O43868 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.33□□□□□ -0.11
SLC28A2O43868 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.33□□□□□ -0.11
SLC28A2O43868 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SLC28A2O43868 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SLC28A2O43868 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SLC28A2O43868 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC28A2O43868 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC28A2O43868 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC28A2O43868 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 VDAC1P7-201ENST00000462417 847 ntBASIC14.33□□□□□ -0.12
SLC28A2O43868 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.33□□□□□ -0.12
SLC28A2O43868 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC28A2O43868 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC28A2O43868 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.33□□□□□ -0.12
SLC28A2O43868 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC28A2O43868 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC28A2O43868 GNRHR2-203ENST00000581100 1187 ntBASIC14.33□□□□□ -0.12
SLC28A2O43868 AL451050.2-201ENST00000606967 682 ntBASIC14.33□□□□□ -0.12
SLC28A2O43868 AP001505.2-201ENST00000616815 443 ntBASIC14.33□□□□□ -0.12
SLC28A2O43868 AC005252.2-201ENST00000624630 1141 ntBASIC14.33□□□□□ -0.12
SLC28A2O43868 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SLC28A2O43868 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SLC28A2O43868 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC28A2O43868 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC28A2O43868 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SLC28A2O43868 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A2O43868 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SLC28A2O43868 AC026748.1-201ENST00000624349 3251 ntBASIC14.32□□□□□ -0.12
SLC28A2O43868 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SLC28A2O43868 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC28A2O43868 SNX18-202ENST00000343017 3140 ntBASIC14.32□□□□□ -0.12
SLC28A2O43868 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SLC28A2O43868 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC28A2O43868 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 CYP46A4P-201ENST00000414953 267 ntBASIC14.32□□□□□ -0.12
SLC28A2O43868 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC28A2O43868 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC28A2O43868 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC28A2O43868 RPSAP36-202ENST00000494591 1261 ntBASIC14.32□□□□□ -0.12
SLC28A2O43868 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC28A2O43868 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SLC28A2O43868 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC28A2O43868 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC28A2O43868 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SLC28A2O43868 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms