Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.88□□□□□ -0.51
UPK2O00526 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC11.88□□□□□ -0.51
UPK2O00526 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.88□□□□□ -0.51
UPK2O00526 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.88□□□□□ -0.51
UPK2O00526 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.88□□□□□ -0.51
UPK2O00526 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
UPK2O00526 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.88□□□□□ -0.51
UPK2O00526 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.88□□□□□ -0.51
UPK2O00526 AC245100.3-201ENST00000441281 285 ntBASIC11.88□□□□□ -0.51
UPK2O00526 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 MESTP3-201ENST00000503460 968 ntBASIC11.88□□□□□ -0.51
UPK2O00526 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 API5-211ENST00000534695 560 ntTSL 5 BASIC11.88□□□□□ -0.51
UPK2O00526 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
UPK2O00526 AC103988.2-201ENST00000561804 725 ntBASIC11.88□□□□□ -0.51
UPK2O00526 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.88□□□□□ -0.51
UPK2O00526 CTBP2P3-201ENST00000585629 1255 ntBASIC11.88□□□□□ -0.51
UPK2O00526 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 AC138696.2-201ENST00000607376 223 ntBASIC11.88□□□□□ -0.51
UPK2O00526 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
UPK2O00526 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.88□□□□□ -0.51
UPK2O00526 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UPK2O00526 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
UPK2O00526 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
UPK2O00526 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 CLUHP2-201ENST00000426660 1303 ntBASIC11.87□□□□□ -0.51
UPK2O00526 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.87□□□□□ -0.51
UPK2O00526 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
UPK2O00526 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.87□□□□□ -0.51
UPK2O00526 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.87□□□□□ -0.51
UPK2O00526 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 MIR770-201ENST00000390219 98 ntBASIC11.87□□□□□ -0.51
UPK2O00526 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.87□□□□□ -0.51
UPK2O00526 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.87□□□□□ -0.51
UPK2O00526 FAM207CP-201ENST00000443486 507 ntBASIC11.87□□□□□ -0.51
UPK2O00526 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
UPK2O00526 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC11.87□□□□□ -0.51
UPK2O00526 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.87□□□□□ -0.51
UPK2O00526 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.87□□□□□ -0.51
UPK2O00526 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.87□□□□□ -0.51
UPK2O00526 AC008494.3-201ENST00000606615 944 ntBASIC11.87□□□□□ -0.51
UPK2O00526 GPALPP1-207ENST00000611650 899 ntBASIC11.87□□□□□ -0.51
UPK2O00526 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
UPK2O00526 WFDC1-204ENST00000613603 549 ntBASIC11.87□□□□□ -0.51
UPK2O00526 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC11.87□□□□□ -0.51
UPK2O00526 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
UPK2O00526 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.87□□□□□ -0.51
UPK2O00526 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.87□□□□□ -0.51
UPK2O00526 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
UPK2O00526 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
UPK2O00526 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
UPK2O00526 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.87□□□□□ -0.51
UPK2O00526 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms