Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 AC044849.1-201ENST00000519737 1188 ntBASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 AL160314.3-201ENST00000556041 767 ntBASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 AC009884.2-201ENST00000603110 324 ntBASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YJEFN3A6XGL0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
YJEFN3A6XGL0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.33■□□□□ 0.05
YJEFN3A6XGL0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
YJEFN3A6XGL0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.33■□□□□ 0.05
YJEFN3A6XGL0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.33■□□□□ 0.05
YJEFN3A6XGL0 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.33■□□□□ 0.05
YJEFN3A6XGL0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
YJEFN3A6XGL0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
YJEFN3A6XGL0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
YJEFN3A6XGL0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 VDAC1P1-201ENST00000439229 848 ntBASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 AP001258.2-201ENST00000529891 490 ntBASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 AL451050.2-201ENST00000606967 682 ntBASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 AC004923.1-202ENST00000642106 209 ntBASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YJEFN3A6XGL0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 AC144522.1-201ENST00000625111 1658 ntBASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 NFIC-211ENST00000641145 8399 ntBASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms