Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 ACTBP8-201ENST00000403258 1108 ntBASIC15.72■□□□□ 0.11
RCCD1A6NED2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 AL355994.1-201ENST00000424379 260 ntBASIC15.72■□□□□ 0.11
RCCD1A6NED2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 LRRC59-203ENST00000576448 1531 ntBASIC15.72■□□□□ 0.11
RCCD1A6NED2 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 SLC7A15P-201ENST00000424028 1363 ntBASIC15.72■□□□□ 0.11
RCCD1A6NED2 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RCCD1A6NED2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.71■□□□□ 0.11
RCCD1A6NED2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RCCD1A6NED2 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
RCCD1A6NED2 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RCCD1A6NED2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
RCCD1A6NED2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RCCD1A6NED2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RCCD1A6NED2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RCCD1A6NED2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.71■□□□□ 0.11
RCCD1A6NED2 AL442647.2-201ENST00000429864 857 ntBASIC15.71■□□□□ 0.11
RCCD1A6NED2 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC15.71■□□□□ 0.11
RCCD1A6NED2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RCCD1A6NED2 AC092552.1-201ENST00000547243 906 ntBASIC15.71■□□□□ 0.11
RCCD1A6NED2 SORD2P-201ENST00000558556 1069 ntBASIC15.71■□□□□ 0.11
RCCD1A6NED2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RCCD1A6NED2 AC138696.2-201ENST00000607376 223 ntBASIC15.71■□□□□ 0.11
RCCD1A6NED2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RCCD1A6NED2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RCCD1A6NED2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RCCD1A6NED2 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RCCD1A6NED2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.71■□□□□ 0.11
RCCD1A6NED2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RCCD1A6NED2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RCCD1A6NED2 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.71■□□□□ 0.11
RCCD1A6NED2 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
RCCD1A6NED2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RCCD1A6NED2 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.71■□□□□ 0.1
RCCD1A6NED2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
RCCD1A6NED2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RCCD1A6NED2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.71■□□□□ 0.1
RCCD1A6NED2 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.71■□□□□ 0.1
RCCD1A6NED2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RCCD1A6NED2 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RCCD1A6NED2 AC004241.5-201ENST00000623870 2448 ntBASIC15.7■□□□□ 0.1
RCCD1A6NED2 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 KRT18P28-201ENST00000453838 1332 ntBASIC15.7■□□□□ 0.1
RCCD1A6NED2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 KC6-207ENST00000600644 2311 ntTSL 3 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 METTL21AP1-201ENST00000438852 635 ntBASIC15.7■□□□□ 0.1
RCCD1A6NED2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 CLUHP6-201ENST00000580789 941 ntBASIC15.7■□□□□ 0.1
RCCD1A6NED2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 AC079791.1-201ENST00000605356 973 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms