Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 AC103810.10-201ENST00000606504 343 ntBASIC12.85□□□□□ -0.35
MBD3L3A6NE82 AC021016.3-201ENST00000608367 477 ntBASIC12.85□□□□□ -0.35
MBD3L3A6NE82 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 AC090386.2-201ENST00000623010 1039 ntBASIC12.85□□□□□ -0.35
MBD3L3A6NE82 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 MYADML-201ENST00000474610 2147 ntBASIC12.85□□□□□ -0.35
MBD3L3A6NE82 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MBD3L3A6NE82 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 AL592076.1-201ENST00000424448 303 ntBASIC12.84□□□□□ -0.35
MBD3L3A6NE82 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 DUTP3-201ENST00000450025 415 ntBASIC12.84□□□□□ -0.35
MBD3L3A6NE82 NOC2LP1-201ENST00000450578 752 ntBASIC12.84□□□□□ -0.35
MBD3L3A6NE82 AP000358.1-201ENST00000456260 156 ntBASIC12.84□□□□□ -0.35
MBD3L3A6NE82 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 AC093752.3-201ENST00000567343 901 ntBASIC12.84□□□□□ -0.35
MBD3L3A6NE82 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 KRT8P31-201ENST00000504812 1408 ntBASIC12.84□□□□□ -0.35
MBD3L3A6NE82 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD3L3A6NE82 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AP002353.1-201ENST00000528257 1599 ntBASIC12.83□□□□□ -0.36
MBD3L3A6NE82 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms