Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
TRAV18A0A075B6X5 AC092053.3-201ENST00000641308 4975 ntBASIC12.77□□□□□ -0.36
TRAV18A0A075B6X5 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV18A0A075B6X5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV18A0A075B6X5 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV18A0A075B6X5 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV18A0A075B6X5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV18A0A075B6X5 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.77□□□□□ -0.36
TRAV18A0A075B6X5 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV18A0A075B6X5 FP325330.2-201ENST00000624219 5630 ntBASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 MIR940-201ENST00000401276 94 ntBASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 RPL37AP1-201ENST00000412502 279 ntBASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 ALG1L5P-201ENST00000482043 771 ntBASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 AC019294.4-201ENST00000561777 2905 ntBASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAV18A0A075B6X5 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 ELL2P1-201ENST00000413990 1906 ntBASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 C8orf49-201ENST00000525043 1968 ntBASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 AC015909.5-201ENST00000624336 2266 ntBASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 TPM4P1-201ENST00000436100 807 ntBASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 AC120114.3-201ENST00000611923 658 ntBASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 BX640515.1-201ENST00000617215 977 ntBASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 AL109936.8-201ENST00000641772 604 ntBASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV18A0A075B6X5 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms