Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HACD3Q9P035 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.02■□□□□ -0
HACD3Q9P035 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.02■□□□□ -0
HACD3Q9P035 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HACD3Q9P035 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.02□□□□□ -0.01
HACD3Q9P035 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.02□□□□□ -0.01
HACD3Q9P035 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.02□□□□□ -0.01
HACD3Q9P035 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HACD3Q9P035 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
HACD3Q9P035 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
HACD3Q9P035 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HACD3Q9P035 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HACD3Q9P035 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.02□□□□□ -0.01
HACD3Q9P035 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.02□□□□□ -0.01
HACD3Q9P035 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.02□□□□□ -0.01
HACD3Q9P035 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
HACD3Q9P035 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HACD3Q9P035 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HACD3Q9P035 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HACD3Q9P035 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
HACD3Q9P035 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.02□□□□□ -0.01
HACD3Q9P035 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HACD3Q9P035 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.02□□□□□ -0.01
HACD3Q9P035 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HACD3Q9P035 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
HACD3Q9P035 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.02□□□□□ -0.01
HACD3Q9P035 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HACD3Q9P035 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.01□□□□□ -0.01
HACD3Q9P035 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HACD3Q9P035 FKBP4P6-201ENST00000457486 1332 ntBASIC15.01□□□□□ -0.01
HACD3Q9P035 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.01□□□□□ -0.01
HACD3Q9P035 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.01□□□□□ -0.01
HACD3Q9P035 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.01□□□□□ -0.01
HACD3Q9P035 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.01□□□□□ -0.01
HACD3Q9P035 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.01□□□□□ -0.01
HACD3Q9P035 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.01□□□□□ -0.01
HACD3Q9P035 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.01□□□□□ -0.01
HACD3Q9P035 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.01□□□□□ -0.01
HACD3Q9P035 AL035252.4-201ENST00000624174 288 ntBASIC15.01□□□□□ -0.01
HACD3Q9P035 AC006453.4-201ENST00000636949 1252 ntBASIC15.01□□□□□ -0.01
HACD3Q9P035 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.01□□□□□ -0.01
HACD3Q9P035 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HACD3Q9P035 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HACD3Q9P035 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HACD3Q9P035 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
HACD3Q9P035 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HACD3Q9P035 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HACD3Q9P035 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15□□□□□ -0.01
HACD3Q9P035 AP000593.2-201ENST00000542775 1433 ntBASIC15□□□□□ -0.01
HACD3Q9P035 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15□□□□□ -0.01
HACD3Q9P035 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HACD3Q9P035 AL359881.3-201ENST00000602640 1721 ntBASIC15□□□□□ -0.01
HACD3Q9P035 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HACD3Q9P035 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15□□□□□ -0.01
HACD3Q9P035 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HACD3Q9P035 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HACD3Q9P035 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15□□□□□ -0.01
HACD3Q9P035 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15□□□□□ -0.01
HACD3Q9P035 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15□□□□□ -0.01
HACD3Q9P035 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HACD3Q9P035 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HACD3Q9P035 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15□□□□□ -0.01
HACD3Q9P035 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HACD3Q9P035 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15□□□□□ -0.01
HACD3Q9P035 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15□□□□□ -0.01
HACD3Q9P035 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15□□□□□ -0.01
HACD3Q9P035 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15□□□□□ -0.01
HACD3Q9P035 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HACD3Q9P035 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15□□□□□ -0.01
HACD3Q9P035 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HACD3Q9P035 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15□□□□□ -0.01
HACD3Q9P035 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15□□□□□ -0.01
HACD3Q9P035 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HACD3Q9P035 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms