Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 AC023090.2-201ENST00000625182 2110 ntBASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CMSS1Q9BQ75 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 HLA-J-203ENST00000494367 1087 ntBASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.73□□□□□ -0.37
CMSS1Q9BQ75 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 AC105206.1-202ENST00000314927 2368 ntBASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.72□□□□□ -0.37
CMSS1Q9BQ75 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms