Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.89□□□□□ -0.51
RNF2Q99496 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
RNF2Q99496 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC11.89□□□□□ -0.51
RNF2Q99496 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 AC015922.1-201ENST00000421102 1152 ntBASIC11.89□□□□□ -0.51
RNF2Q99496 RPL13P2-201ENST00000440687 659 ntBASIC11.89□□□□□ -0.51
RNF2Q99496 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.89□□□□□ -0.51
RNF2Q99496 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 AC022447.6-201ENST00000515522 438 ntBASIC11.89□□□□□ -0.51
RNF2Q99496 TIMM17BP1-201ENST00000545713 516 ntBASIC11.89□□□□□ -0.51
RNF2Q99496 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RNF2Q99496 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.89□□□□□ -0.51
RNF2Q99496 AC004461.2-201ENST00000629517 803 ntBASIC11.89□□□□□ -0.51
RNF2Q99496 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.89□□□□□ -0.51
RNF2Q99496 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
RNF2Q99496 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
RNF2Q99496 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.89□□□□□ -0.51
RNF2Q99496 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
RNF2Q99496 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 AC018665.1-201ENST00000622927 1362 ntBASIC11.89□□□□□ -0.51
RNF2Q99496 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.89□□□□□ -0.51
RNF2Q99496 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 BTBD7P1-201ENST00000447253 1453 ntBASIC11.89□□□□□ -0.51
RNF2Q99496 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.88□□□□□ -0.51
RNF2Q99496 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RNF2Q99496 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF2Q99496 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.88□□□□□ -0.51
RNF2Q99496 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
RNF2Q99496 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
RNF2Q99496 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF2Q99496 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF2Q99496 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
RNF2Q99496 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
RNF2Q99496 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC11.88□□□□□ -0.51
RNF2Q99496 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.88□□□□□ -0.51
RNF2Q99496 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.88□□□□□ -0.51
RNF2Q99496 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.88□□□□□ -0.51
RNF2Q99496 KRT18P43-201ENST00000469825 1281 ntBASIC11.88□□□□□ -0.51
RNF2Q99496 RNA5SP421-201ENST00000516864 134 ntBASIC11.88□□□□□ -0.51
RNF2Q99496 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC11.88□□□□□ -0.51
RNF2Q99496 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF2Q99496 AC135586.1-201ENST00000539323 574 ntBASIC11.88□□□□□ -0.51
RNF2Q99496 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF2Q99496 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.88□□□□□ -0.51
RNF2Q99496 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.88□□□□□ -0.51
RNF2Q99496 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
RNF2Q99496 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF2Q99496 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 AC008738.7-201ENST00000609744 511 ntBASIC11.88□□□□□ -0.51
RNF2Q99496 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.88□□□□□ -0.51
RNF2Q99496 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF2Q99496 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF2Q99496 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
RNF2Q99496 AP001267.2-201ENST00000532619 2086 ntBASIC11.88□□□□□ -0.51
RNF2Q99496 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF2Q99496 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF2Q99496 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.88□□□□□ -0.51
RNF2Q99496 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.88□□□□□ -0.51
RNF2Q99496 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms