Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 ALG3P1-201ENST00000508806 1114 ntBASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 AL590440.2-201ENST00000641973 1595 ntBASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 REXO1L6P-201ENST00000603433 1515 ntBASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 MIR6074-201ENST00000612054 107 ntBASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 AC009542.2-202ENST00000619004 1067 ntBASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 AP000593.2-201ENST00000542775 1433 ntBASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 KHSRPP1-201ENST00000427983 1768 ntBASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SMARCC2Q8TAQ2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 FTLP10-202ENST00000505798 471 ntBASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 DUX4L45-201ENST00000566406 1057 ntBASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SMARCC2Q8TAQ2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms