Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RIF1Q5UIP0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 MIR1226-201ENST00000408658 75 ntBASIC14.06□□□□□ -0.16
RIF1Q5UIP0 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 ZNF877P-201ENST00000437614 612 ntBASIC14.06□□□□□ -0.16
RIF1Q5UIP0 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 BRD7P5-201ENST00000299197 1822 ntBASIC14.06□□□□□ -0.16
RIF1Q5UIP0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 AC019109.1-201ENST00000401725 1874 ntBASIC14.06□□□□□ -0.16
RIF1Q5UIP0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 THAP4-203ENST00000402545 833 ntTSL 5 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 EMP3-204ENST00000596315 761 ntTSL 2 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RIF1Q5UIP0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 AIG1-203ENST00000367596 559 ntTSL 2 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 KRT8P2-201ENST00000556193 944 ntBASIC14.05□□□□□ -0.16
RIF1Q5UIP0 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 AC117503.4-201ENST00000623229 1418 ntBASIC14.05□□□□□ -0.16
RIF1Q5UIP0 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 LINC00265-2P-201ENST00000413372 782 ntBASIC14.05□□□□□ -0.16
RIF1Q5UIP0 AC026884.1-201ENST00000418296 457 ntBASIC14.05□□□□□ -0.16
RIF1Q5UIP0 KRT19P4-201ENST00000443208 943 ntBASIC14.05□□□□□ -0.16
RIF1Q5UIP0 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 RN7SL277P-201ENST00000481521 288 ntBASIC14.05□□□□□ -0.16
RIF1Q5UIP0 RN7SL523P-201ENST00000484401 298 ntBASIC14.05□□□□□ -0.16
RIF1Q5UIP0 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 GRAMD4P6-201ENST00000556999 244 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms