Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE6BP35913 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.98■□□□□ 0.47
PDE6BP35913 AC012158.2-201ENST00000536546 354 ntBASIC17.98■□□□□ 0.47
PDE6BP35913 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE6BP35913 AP001527.2-201ENST00000614441 631 ntBASIC17.98■□□□□ 0.47
PDE6BP35913 AC009145.4-201ENST00000625119 1294 ntBASIC17.98■□□□□ 0.47
PDE6BP35913 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PDE6BP35913 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PDE6BP35913 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE6BP35913 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE6BP35913 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.98■□□□□ 0.47
PDE6BP35913 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PDE6BP35913 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PDE6BP35913 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
PDE6BP35913 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE6BP35913 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE6BP35913 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.98■□□□□ 0.47
PDE6BP35913 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PDE6BP35913 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
PDE6BP35913 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.97■□□□□ 0.47
PDE6BP35913 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PDE6BP35913 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE6BP35913 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.97■□□□□ 0.47
PDE6BP35913 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.97■□□□□ 0.47
PDE6BP35913 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.97■□□□□ 0.47
PDE6BP35913 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE6BP35913 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PDE6BP35913 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PDE6BP35913 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE6BP35913 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE6BP35913 AC092580.1-201ENST00000433998 658 ntBASIC17.97■□□□□ 0.47
PDE6BP35913 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC17.97■□□□□ 0.47
PDE6BP35913 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE6BP35913 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.97■□□□□ 0.47
PDE6BP35913 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.97■□□□□ 0.47
PDE6BP35913 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE6BP35913 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.97■□□□□ 0.47
PDE6BP35913 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.97■□□□□ 0.47
PDE6BP35913 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.97■□□□□ 0.47
PDE6BP35913 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6BP35913 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.97■□□□□ 0.47
PDE6BP35913 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDE6BP35913 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.96■□□□□ 0.47
PDE6BP35913 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.96■□□□□ 0.47
PDE6BP35913 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
PDE6BP35913 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC17.96■□□□□ 0.47
PDE6BP35913 OR8T1P-201ENST00000421347 918 ntBASIC17.96■□□□□ 0.47
PDE6BP35913 AC098934.1-203ENST00000442868 1262 ntBASIC17.96■□□□□ 0.47
PDE6BP35913 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PDE6BP35913 RN7SL23P-201ENST00000484055 275 ntBASIC17.96■□□□□ 0.47
PDE6BP35913 AC226150.1-201ENST00000544259 466 ntBASIC17.96■□□□□ 0.47
PDE6BP35913 AC055811.3-201ENST00000584952 686 ntBASIC17.96■□□□□ 0.47
PDE6BP35913 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.96■□□□□ 0.47
PDE6BP35913 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PDE6BP35913 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
PDE6BP35913 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
PDE6BP35913 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDE6BP35913 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
PDE6BP35913 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.96■□□□□ 0.47
PDE6BP35913 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDE6BP35913 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6BP35913 CTBP2P8-201ENST00000422584 1330 ntBASIC17.96■□□□□ 0.46
PDE6BP35913 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.96■□□□□ 0.46
PDE6BP35913 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE6BP35913 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.95■□□□□ 0.46
PDE6BP35913 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6BP35913 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms