Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.17□□□□□ -0.3
CD40LGP29965 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CD40LGP29965 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.17□□□□□ -0.3
CD40LGP29965 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.17□□□□□ -0.3
CD40LGP29965 AC125807.2-201ENST00000513358 3514 ntBASIC13.17□□□□□ -0.3
CD40LGP29965 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CD40LGP29965 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CD40LGP29965 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40LGP29965 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 BCAR1-209ENST00000546196 1340 ntBASIC13.16□□□□□ -0.3
CD40LGP29965 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40LGP29965 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.16□□□□□ -0.3
CD40LGP29965 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CD40LGP29965 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40LGP29965 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40LGP29965 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40LGP29965 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.16□□□□□ -0.3
CD40LGP29965 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.16□□□□□ -0.3
CD40LGP29965 AC098859.1-201ENST00000502915 1238 ntBASIC13.16□□□□□ -0.3
CD40LGP29965 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.16□□□□□ -0.3
CD40LGP29965 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 AC040169.1-201ENST00000565382 521 ntBASIC13.16□□□□□ -0.3
CD40LGP29965 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 AL009183.1-201ENST00000603760 355 ntBASIC13.16□□□□□ -0.3
CD40LGP29965 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40LGP29965 AC015819.3-201ENST00000624305 2674 ntBASIC13.16□□□□□ -0.3
CD40LGP29965 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
CD40LGP29965 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40LGP29965 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40LGP29965 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CD40LGP29965 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.16□□□□□ -0.3
CD40LGP29965 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40LGP29965 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40LGP29965 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CD40LGP29965 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD40LGP29965 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.15□□□□□ -0.3
CD40LGP29965 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40LGP29965 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40LGP29965 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40LGP29965 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40LGP29965 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.15□□□□□ -0.3
CD40LGP29965 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40LGP29965 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.15□□□□□ -0.3
CD40LGP29965 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CD40LGP29965 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.15□□□□□ -0.3
CD40LGP29965 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40LGP29965 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40LGP29965 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40LGP29965 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
CD40LGP29965 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40LGP29965 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.15□□□□□ -0.3
CD40LGP29965 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CD40LGP29965 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.15□□□□□ -0.3
CD40LGP29965 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40LGP29965 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40LGP29965 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.15□□□□□ -0.3
CD40LGP29965 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CD40LGP29965 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.15□□□□□ -0.3
CD40LGP29965 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.15□□□□□ -0.3
CD40LGP29965 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.15□□□□□ -0.3
CD40LGP29965 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.15□□□□□ -0.3
CD40LGP29965 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CD40LGP29965 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40LGP29965 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.15□□□□□ -0.3
CD40LGP29965 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.15□□□□□ -0.3
CD40LGP29965 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms