Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 TSSK5P-201ENST00000423978 907 ntBASIC13.86□□□□□ -0.19
NR4A1P22736 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.86□□□□□ -0.19
NR4A1P22736 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.86□□□□□ -0.19
NR4A1P22736 SERBP1P3-201ENST00000459980 809 ntBASIC13.86□□□□□ -0.19
NR4A1P22736 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.86□□□□□ -0.19
NR4A1P22736 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.86□□□□□ -0.19
NR4A1P22736 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.86□□□□□ -0.19
NR4A1P22736 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.86□□□□□ -0.19
NR4A1P22736 AJ011932.1-201ENST00000621707 465 ntBASIC13.86□□□□□ -0.19
NR4A1P22736 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.86□□□□□ -0.19
NR4A1P22736 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.86□□□□□ -0.19
NR4A1P22736 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.86□□□□□ -0.19
NR4A1P22736 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NR4A1P22736 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NR4A1P22736 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NR4A1P22736 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 AC138969.3-201ENST00000546612 1459 ntBASIC13.86□□□□□ -0.19
NR4A1P22736 AC138932.2-201ENST00000548268 1459 ntBASIC13.86□□□□□ -0.19
NR4A1P22736 AC126755.4-201ENST00000549796 1459 ntBASIC13.86□□□□□ -0.19
NR4A1P22736 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.86□□□□□ -0.19
NR4A1P22736 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
NR4A1P22736 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NR4A1P22736 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NR4A1P22736 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.85□□□□□ -0.19
NR4A1P22736 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NR4A1P22736 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.85□□□□□ -0.19
NR4A1P22736 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NR4A1P22736 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.85□□□□□ -0.19
NR4A1P22736 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 FAM90A12P-201ENST00000519497 2375 ntBASIC13.85□□□□□ -0.19
NR4A1P22736 FAM90A24P-201ENST00000520792 2369 ntBASIC13.85□□□□□ -0.19
NR4A1P22736 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
NR4A1P22736 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.85□□□□□ -0.19
NR4A1P22736 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NR4A1P22736 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.85□□□□□ -0.19
NR4A1P22736 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
NR4A1P22736 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.85□□□□□ -0.19
NR4A1P22736 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.85□□□□□ -0.19
NR4A1P22736 BCRP1-201ENST00000444246 691 ntBASIC13.85□□□□□ -0.19
NR4A1P22736 AC004890.2-204ENST00000481968 304 ntBASIC13.85□□□□□ -0.19
NR4A1P22736 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.85□□□□□ -0.19
NR4A1P22736 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.85□□□□□ -0.19
NR4A1P22736 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.85□□□□□ -0.19
NR4A1P22736 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.85□□□□□ -0.19
NR4A1P22736 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.85□□□□□ -0.19
NR4A1P22736 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NR4A1P22736 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NR4A1P22736 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.85□□□□□ -0.19
NR4A1P22736 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NR4A1P22736 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.85□□□□□ -0.19
NR4A1P22736 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NR4A1P22736 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NR4A1P22736 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NR4A1P22736 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
NR4A1P22736 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms