Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CFTRP13569 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CFTRP13569 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC24.37■■□□□ 1.49
CFTRP13569 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CFTRP13569 AC092115.1-201ENST00000566277 1402 ntBASIC24.37■■□□□ 1.49
CFTRP13569 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC24.37■■□□□ 1.49
CFTRP13569 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CFTRP13569 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CFTRP13569 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CFTRP13569 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC24.37■■□□□ 1.49
CFTRP13569 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC24.37■■□□□ 1.49
CFTRP13569 HNRNPA1P56-201ENST00000505767 954 ntBASIC24.37■■□□□ 1.49
CFTRP13569 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC24.37■■□□□ 1.49
CFTRP13569 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC24.37■■□□□ 1.49
CFTRP13569 AC078814.4-201ENST00000546650 327 ntBASIC24.37■■□□□ 1.49
CFTRP13569 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC24.37■■□□□ 1.49
CFTRP13569 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC24.37■■□□□ 1.49
CFTRP13569 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC24.37■■□□□ 1.49
CFTRP13569 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC24.37■■□□□ 1.49
CFTRP13569 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CFTRP13569 FAM226B-201ENST00000602508 1490 ntBASIC24.37■■□□□ 1.49
CFTRP13569 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CFTRP13569 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
CFTRP13569 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CFTRP13569 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC24.36■■□□□ 1.49
CFTRP13569 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC24.36■■□□□ 1.49
CFTRP13569 GPX3-202ENST00000517973 612 ntTSL 3 BASIC24.36■■□□□ 1.49
CFTRP13569 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CFTRP13569 AC004801.1-201ENST00000549557 360 ntBASIC24.36■■□□□ 1.49
CFTRP13569 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC24.36■■□□□ 1.49
CFTRP13569 BMF-206ENST00000558774 671 ntTSL 3 BASIC24.36■■□□□ 1.49
CFTRP13569 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CFTRP13569 AC018442.1-201ENST00000421439 2061 ntBASIC24.36■■□□□ 1.49
CFTRP13569 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC24.36■■□□□ 1.49
CFTRP13569 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CFTRP13569 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CFTRP13569 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
CFTRP13569 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CFTRP13569 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CFTRP13569 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC24.35■■□□□ 1.49
CFTRP13569 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CFTRP13569 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
CFTRP13569 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CFTRP13569 AC103592.1-201ENST00000394513 664 ntBASIC24.35■■□□□ 1.49
CFTRP13569 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CFTRP13569 AC133141.1-201ENST00000443015 339 ntBASIC24.35■■□□□ 1.49
CFTRP13569 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC24.35■■□□□ 1.49
CFTRP13569 AC132825.4-202ENST00000578792 434 ntBASIC24.35■■□□□ 1.49
CFTRP13569 MIR4254-201ENST00000581063 76 ntBASIC24.35■■□□□ 1.49
CFTRP13569 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC24.35■■□□□ 1.49
CFTRP13569 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CFTRP13569 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CFTRP13569 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CFTRP13569 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
CFTRP13569 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC24.35■■□□□ 1.49
CFTRP13569 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CFTRP13569 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CFTRP13569 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC24.34■■□□□ 1.49
CFTRP13569 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC24.34■■□□□ 1.49
CFTRP13569 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC24.34■■□□□ 1.49
CFTRP13569 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CFTRP13569 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CFTRP13569 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFTRP13569 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
CFTRP13569 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CFTRP13569 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFTRP13569 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC24.34■■□□□ 1.49
CFTRP13569 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFTRP13569 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CFTRP13569 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC24.34■■□□□ 1.49
CFTRP13569 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC24.34■■□□□ 1.49
CFTRP13569 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC24.34■■□□□ 1.49
CFTRP13569 CSTP2-201ENST00000610599 398 ntBASIC24.34■■□□□ 1.49
CFTRP13569 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
CFTRP13569 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFTRP13569 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
CFTRP13569 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC24.34■■□□□ 1.49
CFTRP13569 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CFTRP13569 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFTRP13569 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CFTRP13569 AC215219.1-201ENST00000400706 1817 ntBASIC24.34■■□□□ 1.49
CFTRP13569 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CFTRP13569 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFTRP13569 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFTRP13569 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
CFTRP13569 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CFTRP13569 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC24.33■■□□□ 1.49
CFTRP13569 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC24.33■■□□□ 1.49
CFTRP13569 RPSAP12-201ENST00000435879 888 ntBASIC24.33■■□□□ 1.49
CFTRP13569 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC24.33■■□□□ 1.49
CFTRP13569 BAK1P2-201ENST00000532665 631 ntBASIC24.33■■□□□ 1.49
CFTRP13569 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CFTRP13569 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC24.33■■□□□ 1.49
CFTRP13569 MT3-202ENST00000561640 514 ntTSL 3 BASIC24.33■■□□□ 1.49
CFTRP13569 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
CFTRP13569 AC233280.19-201ENST00000633223 136 ntBASIC24.33■■□□□ 1.49
CFTRP13569 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC24.33■■□□□ 1.49
CFTRP13569 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CFTRP13569 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC24.33■■□□□ 1.49
CFTRP13569 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms