Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK1BO75841 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK1BO75841 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
UPK1BO75841 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
UPK1BO75841 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
UPK1BO75841 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
UPK1BO75841 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK1BO75841 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK1BO75841 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK1BO75841 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
UPK1BO75841 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
UPK1BO75841 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
UPK1BO75841 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK1BO75841 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
UPK1BO75841 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.87□□□□□ -0.35
UPK1BO75841 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK1BO75841 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.87□□□□□ -0.35
UPK1BO75841 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.87□□□□□ -0.35
UPK1BO75841 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
UPK1BO75841 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.87□□□□□ -0.35
UPK1BO75841 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.87□□□□□ -0.35
UPK1BO75841 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK1BO75841 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK1BO75841 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK1BO75841 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK1BO75841 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
UPK1BO75841 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK1BO75841 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK1BO75841 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK1BO75841 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK1BO75841 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK1BO75841 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.86□□□□□ -0.35
UPK1BO75841 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.86□□□□□ -0.35
UPK1BO75841 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
UPK1BO75841 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
UPK1BO75841 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
UPK1BO75841 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
UPK1BO75841 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.86□□□□□ -0.35
UPK1BO75841 SCARNA2-201ENST00000458748 420 ntBASIC12.86□□□□□ -0.35
UPK1BO75841 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.86□□□□□ -0.35
UPK1BO75841 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.86□□□□□ -0.35
UPK1BO75841 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.86□□□□□ -0.35
UPK1BO75841 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.86□□□□□ -0.35
UPK1BO75841 AL138918.1-201ENST00000568306 659 ntBASIC12.86□□□□□ -0.35
UPK1BO75841 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
UPK1BO75841 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.86□□□□□ -0.35
UPK1BO75841 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.86□□□□□ -0.35
UPK1BO75841 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
UPK1BO75841 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
UPK1BO75841 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK1BO75841 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.86□□□□□ -0.35
UPK1BO75841 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK1BO75841 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms