Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 GIMAP3P-201ENST00000495150 836 ntBASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 DUX4L47-201ENST00000566374 394 ntBASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 MIR3197-201ENST00000582241 73 ntBASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 KRT8P35-201ENST00000483942 1338 ntBASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 AL928921.2-201ENST00000641325 2442 ntBASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HLA-DRB4X5D2U9 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HLA-DRB4X5D2U9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms