Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 COX20P1-201ENST00000366529 357 ntBASIC14.63□□□□□ -0.07
NCDNQ9UBB6 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 ACTBP7-201ENST00000418351 1124 ntBASIC14.63□□□□□ -0.07
NCDNQ9UBB6 TSPY25P-201ENST00000429463 745 ntBASIC14.63□□□□□ -0.07
NCDNQ9UBB6 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 FTH1P22-201ENST00000456305 520 ntBASIC14.63□□□□□ -0.07
NCDNQ9UBB6 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 AL451007.2-201ENST00000632004 563 ntBASIC14.63□□□□□ -0.07
NCDNQ9UBB6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 AC069224.1-201ENST00000566372 1715 ntBASIC14.63□□□□□ -0.07
NCDNQ9UBB6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 AC020910.5-201ENST00000623668 1865 ntBASIC14.63□□□□□ -0.07
NCDNQ9UBB6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 MRPL37P1-201ENST00000592451 1337 ntBASIC14.63□□□□□ -0.07
NCDNQ9UBB6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NCDNQ9UBB6 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.63□□□□□ -0.07
NCDNQ9UBB6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.62□□□□□ -0.07
NCDNQ9UBB6 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 AC244197.1-201ENST00000456494 951 ntBASIC14.62□□□□□ -0.07
NCDNQ9UBB6 MRPL22P1-201ENST00000505398 616 ntBASIC14.62□□□□□ -0.07
NCDNQ9UBB6 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 AP005212.2-201ENST00000584979 510 ntBASIC14.62□□□□□ -0.07
NCDNQ9UBB6 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 HMGB1P24-201ENST00000611897 328 ntBASIC14.62□□□□□ -0.07
NCDNQ9UBB6 AC011471.3-201ENST00000623576 402 ntBASIC14.62□□□□□ -0.07
NCDNQ9UBB6 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 AC002472.4-201ENST00000641915 272 ntBASIC14.62□□□□□ -0.07
NCDNQ9UBB6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.62□□□□□ -0.07
NCDNQ9UBB6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 289.4 ms