Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCFC1R1Q9NWW0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
HCFC1R1Q9NWW0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 AC124068.2-201ENST00000569473 1109 ntBASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 AC084781.1-201ENST00000613737 656 ntBASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 AC105917.1-201ENST00000506637 2539 ntBASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 AC015688.4-201ENST00000580780 1647 ntBASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HCFC1R1Q9NWW0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 LINC00528-201ENST00000600723 2160 ntBASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 AC013268.4-201ENST00000637413 2228 ntBASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 ST13P19-201ENST00000442505 1124 ntBASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 FTH1P22-201ENST00000456305 520 ntBASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 CHCHD2P9-201ENST00000461726 456 ntBASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 RN7SL530P-201ENST00000485097 298 ntBASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 MRPL22P1-201ENST00000505398 616 ntBASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 DNM1P30-201ENST00000563586 452 ntBASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 MIR4649-201ENST00000582839 64 ntBASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 KHSRPP1-201ENST00000427983 1768 ntBASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1R1Q9NWW0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HCFC1R1Q9NWW0 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms