Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 MIR6756-201ENST00000616240 63 ntBASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 AC009093.10-201ENST00000641956 1442 ntBASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 IL9RP3-201ENST00000442856 1674 ntBASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 AC092135.3-201ENST00000624151 1846 ntBASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRMT13Q9NUP7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 TSPY26P-202ENST00000565928 3884 ntBASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 LYPLA2P1-203ENST00000447689 696 ntBASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 AC005041.3-201ENST00000606287 649 ntBASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 TMBIM7P-203ENST00000641617 1718 ntBASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 AC006504.5-208ENST00000588784 2401 ntBASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.07■□□□□ 0.16
TRMT13Q9NUP7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 CR383656.3-201ENST00000551315 183 ntBASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 NUDT4P2-201ENST00000578341 546 ntBASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms