Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.31□□□□□ -0.6
VGLL1Q99990 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
VGLL1Q99990 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.31□□□□□ -0.6
VGLL1Q99990 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 AC114501.2-201ENST00000439631 535 ntBASIC11.31□□□□□ -0.6
VGLL1Q99990 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.31□□□□□ -0.6
VGLL1Q99990 AL589987.1-201ENST00000453380 819 ntBASIC11.31□□□□□ -0.6
VGLL1Q99990 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
VGLL1Q99990 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.31□□□□□ -0.6
VGLL1Q99990 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.31□□□□□ -0.6
VGLL1Q99990 AC097493.3-201ENST00000509725 367 ntBASIC11.31□□□□□ -0.6
VGLL1Q99990 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 AC025678.2-201ENST00000562061 970 ntBASIC11.31□□□□□ -0.6
VGLL1Q99990 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
VGLL1Q99990 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
VGLL1Q99990 AL590560.3-201ENST00000623350 461 ntBASIC11.31□□□□□ -0.6
VGLL1Q99990 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 KRT8P14-201ENST00000414254 1442 ntBASIC11.31□□□□□ -0.6
VGLL1Q99990 DRD5P1-201ENST00000456605 1438 ntBASIC11.31□□□□□ -0.6
VGLL1Q99990 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 AC100757.3-201ENST00000622361 1406 ntBASIC11.31□□□□□ -0.6
VGLL1Q99990 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
VGLL1Q99990 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 AL359881.3-201ENST00000602640 1721 ntBASIC11.31□□□□□ -0.6
VGLL1Q99990 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
VGLL1Q99990 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.31□□□□□ -0.6
VGLL1Q99990 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.31□□□□□ -0.6
VGLL1Q99990 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
VGLL1Q99990 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
VGLL1Q99990 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
VGLL1Q99990 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VGLL1Q99990 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
VGLL1Q99990 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 AL138799.1-201ENST00000448213 1675 ntBASIC11.3□□□□□ -0.6
VGLL1Q99990 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.3□□□□□ -0.6
VGLL1Q99990 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
VGLL1Q99990 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.3□□□□□ -0.6
VGLL1Q99990 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
VGLL1Q99990 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
VGLL1Q99990 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.3□□□□□ -0.6
VGLL1Q99990 Z82170.1-201ENST00000625081 3192 ntBASIC11.3□□□□□ -0.6
VGLL1Q99990 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.3□□□□□ -0.6
VGLL1Q99990 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
VGLL1Q99990 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
VGLL1Q99990 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
VGLL1Q99990 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.3□□□□□ -0.6
VGLL1Q99990 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.3□□□□□ -0.6
VGLL1Q99990 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.3□□□□□ -0.6
VGLL1Q99990 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
VGLL1Q99990 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.3□□□□□ -0.6
VGLL1Q99990 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
VGLL1Q99990 WDR88-203ENST00000592765 651 ntTSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 AC107373.2-201ENST00000607735 490 ntBASIC11.3□□□□□ -0.6
VGLL1Q99990 AL691403.2-201ENST00000618460 490 ntBASIC11.3□□□□□ -0.6
VGLL1Q99990 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 AC005562.1-201ENST00000583030 3219 ntBASIC11.3□□□□□ -0.6
VGLL1Q99990 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.3□□□□□ -0.6
VGLL1Q99990 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms