Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 FAM90A12P-201ENST00000519497 2375 ntBASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 FAM90A24P-201ENST00000520792 2369 ntBASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 AC005562.1-201ENST00000583030 3219 ntBASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 AC023141.5-201ENST00000458585 616 ntBASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 TIMM17BP1-201ENST00000545713 516 ntBASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 TEX28P1-201ENST00000613479 1221 ntBASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 TEX28P2-201ENST00000617764 1221 ntBASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NSMCE2Q96MF7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 MIR6074-201ENST00000612054 107 ntBASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NSMCE2Q96MF7 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms