Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 HLA-V-201ENST00000429037 534 ntBASIC15.75■□□□□ 0.11
LMO3Q8TAP4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 KLF2P1-201ENST00000447438 1042 ntBASIC15.75■□□□□ 0.11
LMO3Q8TAP4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LMO3Q8TAP4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 AC244394.1-201ENST00000435000 1665 ntBASIC15.74■□□□□ 0.11
LMO3Q8TAP4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.74■□□□□ 0.11
LMO3Q8TAP4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 KRT8P24-201ENST00000560290 1559 ntBASIC15.74■□□□□ 0.11
LMO3Q8TAP4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LMO3Q8TAP4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 AC005586.2-201ENST00000563946 837 ntBASIC15.73■□□□□ 0.11
LMO3Q8TAP4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms