Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 LINC01230-201ENST00000625222 3017 ntBASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AC232323.1-201ENST00000540724 2099 ntBASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 ACTBP8-201ENST00000403258 1108 ntBASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 MTX1P1-201ENST00000440904 838 ntBASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AC114812.1-204ENST00000449669 728 ntBASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AC104982.3-201ENST00000581995 514 ntBASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AC005695.3-201ENST00000614522 232 ntBASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AL008638.5-201ENST00000623814 1298 ntBASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC33Q8N5R6 AC018442.1-201ENST00000421439 2061 ntBASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 AC005912.2-201ENST00000619492 2400 ntBASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 LRRC59-203ENST00000576448 1531 ntBASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 AL139094.1-201ENST00000405549 1188 ntBASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 RPSAP36-202ENST00000494591 1261 ntBASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC33Q8N5R6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms