Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.49■□□□□ 0.39
SLX4Q8IY92 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLX4Q8IY92 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLX4Q8IY92 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLX4Q8IY92 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
SLX4Q8IY92 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 KRT8P18-201ENST00000413425 1445 ntBASIC17.48■□□□□ 0.39
SLX4Q8IY92 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.48■□□□□ 0.39
SLX4Q8IY92 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLX4Q8IY92 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 AF274858.1-201ENST00000406288 372 ntBASIC17.47■□□□□ 0.39
SLX4Q8IY92 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 NAV1-210ENST00000593583 726 ntBASIC17.47■□□□□ 0.39
SLX4Q8IY92 AL359091.4-201ENST00000610052 409 ntBASIC17.47■□□□□ 0.39
SLX4Q8IY92 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 PSAT1P2-201ENST00000426107 972 ntBASIC17.47■□□□□ 0.39
SLX4Q8IY92 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLX4Q8IY92 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 DLK1-205ENST00000556051 469 ntTSL 2 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 AC005586.2-201ENST00000563946 837 ntBASIC17.47■□□□□ 0.39
SLX4Q8IY92 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC17.47■□□□□ 0.39
SLX4Q8IY92 PTPN20CP-201ENST00000614090 920 ntBASIC17.47■□□□□ 0.39
SLX4Q8IY92 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLX4Q8IY92 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLX4Q8IY92 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLX4Q8IY92 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLX4Q8IY92 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLX4Q8IY92 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.46■□□□□ 0.39
SLX4Q8IY92 AC091951.1-201ENST00000512854 2465 ntBASIC17.46■□□□□ 0.39
SLX4Q8IY92 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.46■□□□□ 0.39
SLX4Q8IY92 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLX4Q8IY92 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.46■□□□□ 0.39
SLX4Q8IY92 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.46■□□□□ 0.39
SLX4Q8IY92 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLX4Q8IY92 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLX4Q8IY92 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.46■□□□□ 0.39
SLX4Q8IY92 KRT18P4-201ENST00000422599 1288 ntBASIC17.46■□□□□ 0.39
SLX4Q8IY92 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.46■□□□□ 0.39
SLX4Q8IY92 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLX4Q8IY92 LINC00115-201ENST00000473798 1317 ntBASIC17.46■□□□□ 0.39
SLX4Q8IY92 ALG1L7P-201ENST00000502317 768 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms