Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 AL662890.1-201ENST00000396818 632 ntBASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 SAMD11P1-201ENST00000571429 661 ntBASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 AC007663.3-201ENST00000609632 465 ntBASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC144BQ3MJ40 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 KRT8P4-201ENST00000509735 1454 ntBASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 AL391280.1-201ENST00000506969 1062 ntBASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 AC022616.1-201ENST00000518688 554 ntBASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 AP003171.2-201ENST00000528208 925 ntBASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 NDUFV2P1-201ENST00000596415 907 ntBASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 AC113367.3-201ENST00000508316 1912 ntBASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC144BQ3MJ40 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 NKAIN1P1-201ENST00000435754 582 ntBASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 AC044849.1-201ENST00000519737 1188 ntBASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 ZACNP1-201ENST00000612259 710 ntBASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms