Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 AC105206.1-202ENST00000314927 2368 ntBASIC14.62□□□□□ -0.07
CDKL1Q00532 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKL1Q00532 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKL1Q00532 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL1Q00532 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDKL1Q00532 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CDKL1Q00532 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDKL1Q00532 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.61□□□□□ -0.07
CDKL1Q00532 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.61□□□□□ -0.07
CDKL1Q00532 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 AL359881.3-201ENST00000602640 1721 ntBASIC14.61□□□□□ -0.07
CDKL1Q00532 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDKL1Q00532 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 MYO15B-237ENST00000642007 4893 ntBASIC14.61□□□□□ -0.07
CDKL1Q00532 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 MST1P2-201ENST00000457982 2291 ntBASIC14.61□□□□□ -0.07
CDKL1Q00532 SALL4P5-201ENST00000419001 1760 ntBASIC14.61□□□□□ -0.07
CDKL1Q00532 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDKL1Q00532 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDKL1Q00532 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CDKL1Q00532 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDKL1Q00532 AC068587.3-201ENST00000526613 355 ntBASIC14.61□□□□□ -0.07
CDKL1Q00532 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CDKL1Q00532 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.61□□□□□ -0.07
CDKL1Q00532 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDKL1Q00532 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CDKL1Q00532 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CDKL1Q00532 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.61□□□□□ -0.07
CDKL1Q00532 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.61□□□□□ -0.07
CDKL1Q00532 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 AC027307.3-201ENST00000594262 1100 ntBASIC14.61□□□□□ -0.07
CDKL1Q00532 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.61□□□□□ -0.07
CDKL1Q00532 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDKL1Q00532 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 AL138725.1-201ENST00000407347 1314 ntBASIC14.61□□□□□ -0.07
CDKL1Q00532 AC134312.5-201ENST00000568031 1313 ntBASIC14.61□□□□□ -0.07
CDKL1Q00532 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDKL1Q00532 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.61□□□□□ -0.07
CDKL1Q00532 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDKL1Q00532 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CDKL1Q00532 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.6□□□□□ -0.07
CDKL1Q00532 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDKL1Q00532 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDKL1Q00532 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CDKL1Q00532 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDKL1Q00532 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.6□□□□□ -0.07
CDKL1Q00532 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDKL1Q00532 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDKL1Q00532 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CDKL1Q00532 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDKL1Q00532 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDKL1Q00532 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDKL1Q00532 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.6□□□□□ -0.07
CDKL1Q00532 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CDKL1Q00532 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.6□□□□□ -0.07
CDKL1Q00532 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDKL1Q00532 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.6□□□□□ -0.07
CDKL1Q00532 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDKL1Q00532 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.6□□□□□ -0.07
CDKL1Q00532 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDKL1Q00532 AC245100.3-201ENST00000441281 285 ntBASIC14.6□□□□□ -0.07
CDKL1Q00532 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.6□□□□□ -0.07
CDKL1Q00532 MESTP3-201ENST00000503460 968 ntBASIC14.6□□□□□ -0.07
CDKL1Q00532 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CDKL1Q00532 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.6□□□□□ -0.07
CDKL1Q00532 RN7SL48P-201ENST00000579283 293 ntBASIC14.6□□□□□ -0.07
CDKL1Q00532 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.6□□□□□ -0.07
CDKL1Q00532 AC010319.3-201ENST00000597028 470 ntBASIC14.6□□□□□ -0.07
CDKL1Q00532 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.6□□□□□ -0.07
CDKL1Q00532 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDKL1Q00532 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.6□□□□□ -0.07
CDKL1Q00532 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.6□□□□□ -0.07
CDKL1Q00532 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms