Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
UBE2AP49459 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBE2AP49459 CICP20-201ENST00000443330 2801 ntBASIC9.49□□□□□ -0.89
UBE2AP49459 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBE2AP49459 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
UBE2AP49459 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE2AP49459 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE2AP49459 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE2AP49459 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBE2AP49459 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE2AP49459 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE2AP49459 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC9.49□□□□□ -0.89
UBE2AP49459 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC9.49□□□□□ -0.89
UBE2AP49459 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
UBE2AP49459 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE2AP49459 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC9.48□□□□□ -0.89
UBE2AP49459 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC9.48□□□□□ -0.89
UBE2AP49459 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC9.48□□□□□ -0.89
UBE2AP49459 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC9.48□□□□□ -0.89
UBE2AP49459 AJ011931.1-201ENST00000618749 2492 ntBASIC9.48□□□□□ -0.89
UBE2AP49459 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
UBE2AP49459 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC9.48□□□□□ -0.89
UBE2AP49459 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
UBE2AP49459 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
UBE2AP49459 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC9.48□□□□□ -0.89
UBE2AP49459 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
UBE2AP49459 PES1-204ENST00000402284 2144 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 SUN1-204ENST00000403868 978 ntTSL 2 BASIC9.48□□□□□ -0.89
UBE2AP49459 MEP1AP4-201ENST00000423244 1087 ntBASIC9.48□□□□□ -0.89
UBE2AP49459 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC9.48□□□□□ -0.89
UBE2AP49459 RNA5SP421-201ENST00000516864 134 ntBASIC9.48□□□□□ -0.89
UBE2AP49459 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
UBE2AP49459 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC9.48□□□□□ -0.89
UBE2AP49459 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC9.48□□□□□ -0.89
UBE2AP49459 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC9.48□□□□□ -0.89
UBE2AP49459 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 AC104794.3-201ENST00000566840 1248 ntBASIC9.48□□□□□ -0.89
UBE2AP49459 AC092337.1-201ENST00000568699 1129 ntBASIC9.48□□□□□ -0.89
UBE2AP49459 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
UBE2AP49459 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC9.48□□□□□ -0.89
UBE2AP49459 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC9.48□□□□□ -0.89
UBE2AP49459 GPALPP1-207ENST00000611650 899 ntBASIC9.48□□□□□ -0.89
UBE2AP49459 AL158212.4-201ENST00000624062 1286 ntBASIC9.48□□□□□ -0.89
UBE2AP49459 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 AC007787.1-201ENST00000588095 1583 ntBASIC9.48□□□□□ -0.89
UBE2AP49459 AC023908.3-201ENST00000564211 3047 ntBASIC9.48□□□□□ -0.89
UBE2AP49459 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 REXO1L4P-201ENST00000605109 1937 ntBASIC9.48□□□□□ -0.89
UBE2AP49459 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
UBE2AP49459 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
UBE2AP49459 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
UBE2AP49459 LINC00552-201ENST00000625151 2579 ntBASIC9.48□□□□□ -0.89
UBE2AP49459 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE2AP49459 PCDHGB8P-201ENST00000502926 1973 ntBASIC9.48□□□□□ -0.89
UBE2AP49459 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms