Protein–RNA interactions for Protein: P47992

XCL1, Lymphotactin, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1P47992 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
XCL1P47992 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
XCL1P47992 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
XCL1P47992 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.27□□□□□ -0.76
XCL1P47992 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
XCL1P47992 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
XCL1P47992 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.27□□□□□ -0.76
XCL1P47992 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
XCL1P47992 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
XCL1P47992 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC10.27□□□□□ -0.76
XCL1P47992 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
XCL1P47992 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
XCL1P47992 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
XCL1P47992 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC10.27□□□□□ -0.77
XCL1P47992 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.27□□□□□ -0.77
XCL1P47992 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC10.27□□□□□ -0.77
XCL1P47992 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
XCL1P47992 AC092580.3-201ENST00000430932 139 ntBASIC10.27□□□□□ -0.77
XCL1P47992 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC10.27□□□□□ -0.77
XCL1P47992 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC10.27□□□□□ -0.77
XCL1P47992 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC10.27□□□□□ -0.77
XCL1P47992 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.27□□□□□ -0.77
XCL1P47992 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC10.27□□□□□ -0.77
XCL1P47992 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC10.27□□□□□ -0.77
XCL1P47992 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.27□□□□□ -0.77
XCL1P47992 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.27□□□□□ -0.77
XCL1P47992 STOM-203ENST00000538954 1257 ntTSL 5 BASIC10.27□□□□□ -0.77
XCL1P47992 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC10.27□□□□□ -0.77
XCL1P47992 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.27□□□□□ -0.77
XCL1P47992 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC10.27□□□□□ -0.77
XCL1P47992 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.27□□□□□ -0.77
XCL1P47992 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.27□□□□□ -0.77
XCL1P47992 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 AL590560.3-201ENST00000623350 461 ntBASIC10.27□□□□□ -0.77
XCL1P47992 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.27□□□□□ -0.77
XCL1P47992 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 AC004899.2-201ENST00000622993 3860 ntBASIC10.27□□□□□ -0.77
XCL1P47992 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.27□□□□□ -0.77
XCL1P47992 AC006504.5-208ENST00000588784 2401 ntBASIC10.27□□□□□ -0.77
XCL1P47992 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
XCL1P47992 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC10.27□□□□□ -0.77
XCL1P47992 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
XCL1P47992 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
XCL1P47992 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC10.27□□□□□ -0.77
XCL1P47992 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
XCL1P47992 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC10.26□□□□□ -0.77
XCL1P47992 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
XCL1P47992 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
XCL1P47992 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
XCL1P47992 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC10.26□□□□□ -0.77
XCL1P47992 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC10.26□□□□□ -0.77
XCL1P47992 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
XCL1P47992 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
XCL1P47992 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC10.26□□□□□ -0.77
XCL1P47992 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC10.26□□□□□ -0.77
XCL1P47992 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
XCL1P47992 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms