Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LTBRP36941 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.91□□□□□ -0.02
LTBRP36941 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LTBRP36941 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.91□□□□□ -0.02
LTBRP36941 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
LTBRP36941 LAP3P2-201ENST00000454686 1454 ntBASIC14.91□□□□□ -0.02
LTBRP36941 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LTBRP36941 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.91□□□□□ -0.02
LTBRP36941 LTB4R2-202ENST00000528054 3092 ntBASIC14.91□□□□□ -0.02
LTBRP36941 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.91□□□□□ -0.02
LTBRP36941 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.91□□□□□ -0.02
LTBRP36941 LINC00265-2P-201ENST00000413372 782 ntBASIC14.91□□□□□ -0.02
LTBRP36941 AC006987.1-201ENST00000413610 527 ntBASIC14.91□□□□□ -0.02
LTBRP36941 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.91□□□□□ -0.02
LTBRP36941 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.91□□□□□ -0.02
LTBRP36941 BCRP4-201ENST00000506079 804 ntBASIC14.91□□□□□ -0.02
LTBRP36941 AC092612.1-201ENST00000514501 998 ntBASIC14.91□□□□□ -0.02
LTBRP36941 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.91□□□□□ -0.02
LTBRP36941 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC14.91□□□□□ -0.02
LTBRP36941 AL132994.1-201ENST00000554098 400 ntBASIC14.91□□□□□ -0.02
LTBRP36941 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC14.91□□□□□ -0.02
LTBRP36941 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.91□□□□□ -0.02
LTBRP36941 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
LTBRP36941 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
LTBRP36941 AL009176.1-201ENST00000607876 650 ntBASIC14.91□□□□□ -0.02
LTBRP36941 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.91□□□□□ -0.02
LTBRP36941 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC14.91□□□□□ -0.02
LTBRP36941 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.91□□□□□ -0.02
LTBRP36941 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.91□□□□□ -0.02
LTBRP36941 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.91□□□□□ -0.02
LTBRP36941 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
LTBRP36941 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.91□□□□□ -0.02
LTBRP36941 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LTBRP36941 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LTBRP36941 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.9□□□□□ -0.02
LTBRP36941 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 OR6D1P-203ENST00000641209 4860 ntBASIC14.9□□□□□ -0.02
LTBRP36941 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.9□□□□□ -0.02
LTBRP36941 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 GEMIN8P4-201ENST00000380526 729 ntBASIC14.9□□□□□ -0.02
LTBRP36941 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.9□□□□□ -0.02
LTBRP36941 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LTBRP36941 KRT18P4-201ENST00000422599 1288 ntBASIC14.9□□□□□ -0.02
LTBRP36941 AL080243.1-201ENST00000423293 1060 ntBASIC14.9□□□□□ -0.02
LTBRP36941 PSAT1P2-201ENST00000426107 972 ntBASIC14.9□□□□□ -0.02
LTBRP36941 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.9□□□□□ -0.02
LTBRP36941 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.9□□□□□ -0.02
LTBRP36941 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms