Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
LSP1P33241 MIR346-201ENST00000362234 95 ntBASIC14.91□□□□□ -0.02
LSP1P33241 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LSP1P33241 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LSP1P33241 AC136604.1-202ENST00000425471 771 ntBASIC14.91□□□□□ -0.02
LSP1P33241 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.91□□□□□ -0.02
LSP1P33241 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LSP1P33241 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.91□□□□□ -0.02
LSP1P33241 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.91□□□□□ -0.02
LSP1P33241 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.91□□□□□ -0.02
LSP1P33241 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LSP1P33241 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.91□□□□□ -0.02
LSP1P33241 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.91□□□□□ -0.02
LSP1P33241 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.91□□□□□ -0.02
LSP1P33241 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
LSP1P33241 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.91□□□□□ -0.02
LSP1P33241 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LSP1P33241 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.91□□□□□ -0.02
LSP1P33241 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LSP1P33241 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.91□□□□□ -0.02
LSP1P33241 AC148477.8-201ENST00000624298 468 ntBASIC14.91□□□□□ -0.02
LSP1P33241 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LSP1P33241 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
LSP1P33241 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LSP1P33241 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LSP1P33241 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LSP1P33241 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LSP1P33241 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.91□□□□□ -0.02
LSP1P33241 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LSP1P33241 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.91□□□□□ -0.02
LSP1P33241 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
LSP1P33241 AL022323.5-201ENST00000624101 2059 ntBASIC14.91□□□□□ -0.02
LSP1P33241 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LSP1P33241 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LSP1P33241 KRT8P35-201ENST00000483942 1338 ntBASIC14.91□□□□□ -0.02
LSP1P33241 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.91□□□□□ -0.02
LSP1P33241 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC14.91□□□□□ -0.02
LSP1P33241 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LSP1P33241 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
LSP1P33241 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.9□□□□□ -0.02
LSP1P33241 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
LSP1P33241 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.9□□□□□ -0.02
LSP1P33241 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 MEX3B-202ENST00000558133 4333 ntBASIC14.9□□□□□ -0.02
LSP1P33241 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LSP1P33241 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
LSP1P33241 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.9□□□□□ -0.02
LSP1P33241 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
LSP1P33241 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LSP1P33241 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.9□□□□□ -0.02
LSP1P33241 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 FDX1P1-201ENST00000449115 551 ntBASIC14.9□□□□□ -0.02
LSP1P33241 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.9□□□□□ -0.02
LSP1P33241 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.9□□□□□ -0.02
LSP1P33241 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LSP1P33241 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.9□□□□□ -0.02
LSP1P33241 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.9□□□□□ -0.02
LSP1P33241 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.9□□□□□ -0.02
LSP1P33241 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.9□□□□□ -0.02
LSP1P33241 AP000842.3-202ENST00000569238 1080 ntBASIC14.9□□□□□ -0.02
LSP1P33241 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.9□□□□□ -0.02
LSP1P33241 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LSP1P33241 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.9□□□□□ -0.02
LSP1P33241 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.9□□□□□ -0.02
LSP1P33241 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LSP1P33241 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LSP1P33241 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LSP1P33241 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.9□□□□□ -0.02
LSP1P33241 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 HLA-A-201ENST00000376802 1334 ntBASIC14.9□□□□□ -0.02
LSP1P33241 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSP1P33241 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.9□□□□□ -0.02
LSP1P33241 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LSP1P33241 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.89□□□□□ -0.03
LSP1P33241 AC024075.2-201ENST00000598112 1473 ntBASIC14.89□□□□□ -0.03
LSP1P33241 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.89□□□□□ -0.03
LSP1P33241 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms