Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHAP12694 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
BCKDHAP12694 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHAP12694 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHAP12694 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHAP12694 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHAP12694 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHAP12694 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHAP12694 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHAP12694 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
BCKDHAP12694 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
BCKDHAP12694 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.18□□□□□ -0.14
BCKDHAP12694 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHAP12694 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHAP12694 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHAP12694 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
BCKDHAP12694 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
BCKDHAP12694 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.17□□□□□ -0.14
BCKDHAP12694 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.17□□□□□ -0.14
BCKDHAP12694 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.17□□□□□ -0.14
BCKDHAP12694 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.17□□□□□ -0.14
BCKDHAP12694 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 MIR770-201ENST00000390219 98 ntBASIC14.17□□□□□ -0.14
BCKDHAP12694 FAM207CP-201ENST00000443486 507 ntBASIC14.17□□□□□ -0.14
BCKDHAP12694 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.17□□□□□ -0.14
BCKDHAP12694 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.17□□□□□ -0.14
BCKDHAP12694 AC138696.2-201ENST00000607376 223 ntBASIC14.17□□□□□ -0.14
BCKDHAP12694 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.17□□□□□ -0.14
BCKDHAP12694 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
BCKDHAP12694 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
BCKDHAP12694 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.17□□□□□ -0.14
BCKDHAP12694 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 AC011498.7-201ENST00000624986 2027 ntBASIC14.17□□□□□ -0.14
BCKDHAP12694 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.17□□□□□ -0.14
BCKDHAP12694 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
BCKDHAP12694 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BCKDHAP12694 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
BCKDHAP12694 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.17□□□□□ -0.14
BCKDHAP12694 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.16□□□□□ -0.14
BCKDHAP12694 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
BCKDHAP12694 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.16□□□□□ -0.14
BCKDHAP12694 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
BCKDHAP12694 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.16□□□□□ -0.14
BCKDHAP12694 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.16□□□□□ -0.14
BCKDHAP12694 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.16□□□□□ -0.14
BCKDHAP12694 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
BCKDHAP12694 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
BCKDHAP12694 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.16□□□□□ -0.14
BCKDHAP12694 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.16□□□□□ -0.14
BCKDHAP12694 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHAP12694 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
BCKDHAP12694 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
BCKDHAP12694 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms