Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
UBL4AP11441 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.8□□□□□ -0.2
UBL4AP11441 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
UBL4AP11441 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
UBL4AP11441 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
UBL4AP11441 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.8□□□□□ -0.2
UBL4AP11441 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
UBL4AP11441 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
UBL4AP11441 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBL4AP11441 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.79□□□□□ -0.2
UBL4AP11441 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.79□□□□□ -0.2
UBL4AP11441 AL355864.2-201ENST00000447420 863 ntBASIC13.79□□□□□ -0.2
UBL4AP11441 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.79□□□□□ -0.2
UBL4AP11441 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.79□□□□□ -0.2
UBL4AP11441 AL596325.1-201ENST00000563991 1082 ntBASIC13.79□□□□□ -0.2
UBL4AP11441 AC015936.2-201ENST00000593177 259 ntBASIC13.79□□□□□ -0.2
UBL4AP11441 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
UBL4AP11441 RPSAP52-203ENST00000622976 1023 ntBASIC13.79□□□□□ -0.2
UBL4AP11441 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBL4AP11441 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.79□□□□□ -0.2
UBL4AP11441 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.79□□□□□ -0.2
UBL4AP11441 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.79□□□□□ -0.2
UBL4AP11441 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
UBL4AP11441 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.79□□□□□ -0.2
UBL4AP11441 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
UBL4AP11441 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.79□□□□□ -0.2
UBL4AP11441 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBL4AP11441 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.79□□□□□ -0.2
UBL4AP11441 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UBL4AP11441 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.78□□□□□ -0.2
UBL4AP11441 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.78□□□□□ -0.2
UBL4AP11441 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UBL4AP11441 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UBL4AP11441 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.78□□□□□ -0.2
UBL4AP11441 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
UBL4AP11441 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.78□□□□□ -0.2
UBL4AP11441 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UBL4AP11441 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
UBL4AP11441 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.78□□□□□ -0.2
UBL4AP11441 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms