Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.93□□□□□ -0.02
RETP07949 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.93□□□□□ -0.02
RETP07949 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.93□□□□□ -0.02
RETP07949 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.93□□□□□ -0.02
RETP07949 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.93□□□□□ -0.02
RETP07949 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
RETP07949 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.93□□□□□ -0.02
RETP07949 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
RETP07949 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.93□□□□□ -0.02
RETP07949 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC14.93□□□□□ -0.02
RETP07949 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.93□□□□□ -0.02
RETP07949 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.93□□□□□ -0.02
RETP07949 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
RETP07949 MIR4649-201ENST00000582839 64 ntBASIC14.93□□□□□ -0.02
RETP07949 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.93□□□□□ -0.02
RETP07949 AC009955.4-201ENST00000597192 544 ntBASIC14.93□□□□□ -0.02
RETP07949 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC14.93□□□□□ -0.02
RETP07949 MIR6842-201ENST00000612539 65 ntBASIC14.93□□□□□ -0.02
RETP07949 YRDCP1-201ENST00000621419 643 ntBASIC14.93□□□□□ -0.02
RETP07949 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RETP07949 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RETP07949 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
RETP07949 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 AC005089.1-201ENST00000619486 2241 ntBASIC14.93□□□□□ -0.02
RETP07949 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.93□□□□□ -0.02
RETP07949 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RETP07949 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
RETP07949 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RETP07949 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RETP07949 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.92□□□□□ -0.02
RETP07949 CLUHP2-201ENST00000426660 1303 ntBASIC14.92□□□□□ -0.02
RETP07949 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.92□□□□□ -0.02
RETP07949 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.92□□□□□ -0.02
RETP07949 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.92□□□□□ -0.02
RETP07949 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RETP07949 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RETP07949 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RETP07949 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.92□□□□□ -0.02
RETP07949 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RETP07949 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
RETP07949 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RETP07949 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.92□□□□□ -0.02
RETP07949 RN7SL258P-201ENST00000478664 300 ntBASIC14.92□□□□□ -0.02
RETP07949 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.92□□□□□ -0.02
RETP07949 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
RETP07949 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.92□□□□□ -0.02
RETP07949 AC141586.1-203ENST00000567242 366 ntBASIC14.92□□□□□ -0.02
RETP07949 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RETP07949 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.92□□□□□ -0.02
RETP07949 AC242376.2-201ENST00000619355 883 ntBASIC14.92□□□□□ -0.02
RETP07949 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.92□□□□□ -0.02
RETP07949 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RETP07949 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RETP07949 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RETP07949 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RETP07949 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RETP07949 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RETP07949 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RETP07949 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RETP07949 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.92□□□□□ -0.02
RETP07949 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.92□□□□□ -0.02
RETP07949 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.92□□□□□ -0.02
RETP07949 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RETP07949 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.92□□□□□ -0.02
RETP07949 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.92□□□□□ -0.02
RETP07949 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RETP07949 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RETP07949 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RETP07949 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RETP07949 AC232323.1-201ENST00000540724 2099 ntBASIC14.91□□□□□ -0.02
RETP07949 REXO1L5P-201ENST00000622260 2098 ntBASIC14.91□□□□□ -0.02
RETP07949 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.91□□□□□ -0.02
RETP07949 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.91□□□□□ -0.02
RETP07949 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RETP07949 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RETP07949 AC026748.1-201ENST00000624349 3251 ntBASIC14.91□□□□□ -0.02
RETP07949 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RETP07949 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
RETP07949 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms