Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.68■□□□□ 0.1
TIMP1P01033 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.68■□□□□ 0.1
TIMP1P01033 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.67■□□□□ 0.1
TIMP1P01033 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TIMP1P01033 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.67■□□□□ 0.1
TIMP1P01033 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.67■□□□□ 0.1
TIMP1P01033 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.67■□□□□ 0.1
TIMP1P01033 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.67■□□□□ 0.1
TIMP1P01033 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TIMP1P01033 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 AL109809.1-201ENST00000418979 1367 ntBASIC15.67■□□□□ 0.1
TIMP1P01033 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.67■□□□□ 0.1
TIMP1P01033 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC15.67■□□□□ 0.1
TIMP1P01033 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TIMP1P01033 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.67■□□□□ 0.1
TIMP1P01033 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC15.67■□□□□ 0.1
TIMP1P01033 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.67■□□□□ 0.1
TIMP1P01033 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.67■□□□□ 0.1
TIMP1P01033 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.67■□□□□ 0.1
TIMP1P01033 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TIMP1P01033 AC145285.5-201ENST00000562217 361 ntBASIC15.67■□□□□ 0.1
TIMP1P01033 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC15.67■□□□□ 0.1
TIMP1P01033 MIR5001-201ENST00000580185 100 ntBASIC15.67■□□□□ 0.1
TIMP1P01033 MBP-238ENST00000580402 915 ntTSL 5 BASIC15.67■□□□□ 0.1
TIMP1P01033 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.67■□□□□ 0.1
TIMP1P01033 AL021707.6-201ENST00000609212 491 ntBASIC15.67■□□□□ 0.1
TIMP1P01033 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC15.67■□□□□ 0.1
TIMP1P01033 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.67■□□□□ 0.1
TIMP1P01033 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TIMP1P01033 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TIMP1P01033 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TIMP1P01033 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TIMP1P01033 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TIMP1P01033 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TIMP1P01033 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.66■□□□□ 0.1
TIMP1P01033 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TIMP1P01033 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.66■□□□□ 0.1
TIMP1P01033 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 AC006987.1-201ENST00000413610 527 ntBASIC15.66■□□□□ 0.1
TIMP1P01033 PPP1R2P4-201ENST00000424051 595 ntBASIC15.66■□□□□ 0.1
TIMP1P01033 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.66■□□□□ 0.1
TIMP1P01033 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC15.66■□□□□ 0.1
TIMP1P01033 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.66■□□□□ 0.1
TIMP1P01033 GRPEL2P1-201ENST00000453145 339 ntBASIC15.66■□□□□ 0.1
TIMP1P01033 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TIMP1P01033 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.66■□□□□ 0.1
TIMP1P01033 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC15.66■□□□□ 0.1
TIMP1P01033 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.66■□□□□ 0.1
TIMP1P01033 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC15.66■□□□□ 0.1
TIMP1P01033 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC15.66■□□□□ 0.1
TIMP1P01033 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.66■□□□□ 0.1
TIMP1P01033 FOXN3-AS2-201ENST00000554071 1262 ntBASIC15.66■□□□□ 0.1
TIMP1P01033 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.66■□□□□ 0.1
TIMP1P01033 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC15.66■□□□□ 0.1
TIMP1P01033 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC15.66■□□□□ 0.1
TIMP1P01033 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.66■□□□□ 0.1
TIMP1P01033 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.66■□□□□ 0.1
TIMP1P01033 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TIMP1P01033 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
TIMP1P01033 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TIMP1P01033 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms