Protein–RNA interactions for Protein: P00533

EGFR, Epidermal growth factor receptor, humanhuman

Predictions only

Length 1,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EGFRP00533 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EGFRP00533 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EGFRP00533 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.25■□□□□ 0.35
EGFRP00533 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EGFRP00533 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EGFRP00533 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.25■□□□□ 0.35
EGFRP00533 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.24■□□□□ 0.35
EGFRP00533 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.24■□□□□ 0.35
EGFRP00533 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.24■□□□□ 0.35
EGFRP00533 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.24■□□□□ 0.35
EGFRP00533 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 MIR566-201ENST00000385187 94 ntBASIC17.24■□□□□ 0.35
EGFRP00533 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.24■□□□□ 0.35
EGFRP00533 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.24■□□□□ 0.35
EGFRP00533 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.24■□□□□ 0.35
EGFRP00533 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.24■□□□□ 0.35
EGFRP00533 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.24■□□□□ 0.35
EGFRP00533 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.24■□□□□ 0.35
EGFRP00533 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
EGFRP00533 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EGFRP00533 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.23■□□□□ 0.35
EGFRP00533 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
EGFRP00533 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.23■□□□□ 0.35
EGFRP00533 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
EGFRP00533 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 AC067931.2-201ENST00000623655 2003 ntBASIC17.23■□□□□ 0.35
EGFRP00533 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
EGFRP00533 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
EGFRP00533 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.23■□□□□ 0.35
EGFRP00533 AL591122.2-201ENST00000624125 1853 ntBASIC17.23■□□□□ 0.35
EGFRP00533 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.23■□□□□ 0.35
EGFRP00533 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 ACE3P-201ENST00000423435 1973 ntBASIC17.23■□□□□ 0.35
EGFRP00533 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
EGFRP00533 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
EGFRP00533 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
EGFRP00533 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.23■□□□□ 0.35
EGFRP00533 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.23■□□□□ 0.35
EGFRP00533 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.23■□□□□ 0.35
EGFRP00533 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC17.23■□□□□ 0.35
EGFRP00533 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
EGFRP00533 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.23■□□□□ 0.35
EGFRP00533 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 PEBP1P2-201ENST00000603980 558 ntBASIC17.23■□□□□ 0.35
EGFRP00533 AL139339.2-201ENST00000608063 657 ntBASIC17.23■□□□□ 0.35
EGFRP00533 AC018695.6-201ENST00000614011 534 ntBASIC17.23■□□□□ 0.35
EGFRP00533 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.23■□□□□ 0.35
EGFRP00533 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.23■□□□□ 0.35
EGFRP00533 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.23■□□□□ 0.35
EGFRP00533 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
EGFRP00533 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.23■□□□□ 0.35
EGFRP00533 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
EGFRP00533 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
EGFRP00533 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EGFRP00533 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.22■□□□□ 0.35
EGFRP00533 CTBP2P8-201ENST00000422584 1330 ntBASIC17.22■□□□□ 0.35
EGFRP00533 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms